Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01482 ATGGGAAGGGCTCCTTGTTGTTCCAAAGTAGGGTTGCACAAAGGTCCATGGACTCCTAAAGAAGATGCATTGCTTACAAAATATATCCAAGCTCATGGAGAAGGGCAATGGAAATCACTACCCAAAAAAGCTGGGCTTCTTAGATGTGGAAAAAGTTGTAGATTGAGATGGATGAACTATCTGAGACCAGATATAAAGAGAGGAAACATAAGCCCAGAAGAAGATGATCTTATAATCAGAATGCATTCACTTTTGGGGAATAGATGGTCCCTCATAGCAGGAAGGTTACCAGGAAGAACAGACAATGAAATAAAGAACTATTGGAACACCCATCTATGCAAAAAGATGAAAACTCCAACAGCAGAAGATACTACTGACACACCCAATGTGTTGTTGGAGAGTCCTGAACAAGAACCTGCGAGTGGCAACAAAAAGAAGAAGAACGGTGGGAAAAAGAAGAACAAGCAGAAGAACAAAGGAGGCACAAATAGTGCTGAGCCACCAAAGACACAAGTTTATCTACCGAAACCAATTAGAGTGAAGGCTTTGTATTTACCAAGAACAGACAGTAACACATACACCTTTGATTCCAACTCAGCTAGTGCATCAACAAACCAAGAGAAGGAGGAAAGCCCTTTAACAAAAGAATCAAACTTGGCTAGTGAAATTGGAAATGTGGGAGAAAGTGATGATTTTGGGTTCTTCAGTGAGGACCATGACTTGGTCAACGCCTCAGATATTGAATGCCACTCTTATTTTCCCTCAGATCATGGCTCTCTACAGCAACTGTATGAAGAATATTACCACCTCCTGAACATGGACCACACCCAATTCATCGAAATGAATTCATTTGGGGAATCTTTATTGGTGTGA 873 0.4101 MGRAPCCSKVGLHKGPWTPKEDALLTKYIQAHGEGQWKSLPKKAGLLRCGKSCRLRWMNYLRPDIKRGNISPEEDDLIIRMHSLLGNRWSLIAGRLPGRTDNEIKNYWNTHLCKKMKTPTAEDTTDTPNVLLESPEQEPASGNKKKKNGGKKKNKQKNKGGTNSAEPPKTQVYLPKPIRVKALYLPRTDSNTYTFDSNSASASTNQEKEESPLTKESNLASEIGNVGESDDFGFFSEDHDLVNASDIECHSYFPSDHGSLQQLYEEYYHLLNMDHTQFIEMNSFGESLLV* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01482 290 MobiDBLite consensus disorder prediction 122 136 - -
Phac10g01482 290 CDD SANT 16 61 IPR001005 -
Phac10g01482 290 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Phac10g01482 290 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 219 - -
Phac10g01482 290 SMART sant 13 63 IPR001005 -
Phac10g01482 290 SMART sant 66 114 IPR001005 -
Phac10g01482 290 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Phac10g01482 290 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Phac10g01482 290 Gene3D - 71 166 - -
Phac10g01482 290 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Phac10g01482 290 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Phac10g01482 290 FunFam Myb transcription factor 11 67 - -
Phac10g01482 290 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Phac10g01482 290 MobiDBLite consensus disorder prediction 193 217 - -
Phac10g01482 290 CDD SANT 71 112 IPR001005 -
Phac10g01482 290 Gene3D - 14 66 - -
Phac10g01482 290 MobiDBLite consensus disorder prediction 118 173 - -
Phac10g01482 290 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Phac10g01482 290 MobiDBLite consensus disorder prediction 193 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01482 Phac-Chr10 37994629 37996047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01482 1 132 MYB Transcription Factor Family AT5G49330 68.182 1.23e-64 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac10g01482 Myb_DNA-binding 9.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01482 K09422 - gmx:100101857 469.929