Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01473 ATGGACCAACCGCCGCACCACCACAGCAGCAACGCCACCATCTCCGCCGATAAGCCCTCCACGCCGCGAGGCGGCACGCGTCACCCACTCTTCCGCGGAGTCCGCAAGCGCCGCTGGGGAAAATGGGTGTCCGAAATCCGGGAGCCGCGCAAGAAATCGCGCATATGGCTTGGCTCCTTTCCGGCGCCGGAGATGGCGGCGAAGGCCTACGATGTCGCCGCCTACTGCCTCAAGGGCCGCAAGGCGCAGCTCAATTTCCCCGACGAGGTCCACCGCCTCCCGCCGCTCCCTTCCGCCAGCACTCCCCGCGACATCCAGGCTGCCGCCGCCAAGGCCGCGCACATGATGATGGTCCAGGCCGCCGTCGCCACCGATTCTCCGGAGAAGAGCAGCATTACCTCCGGATGCGACCACGCAGCCGATGACTTCTGGCGCGAGATTGAGCTGCCGGAGCTCCTCCACAGAAAGTGGTGGACCTCTTCCGGCGAATCCTCGCCGTGGACGGAGACTGACCTCCCGCCGCAGCAACCCTTCACCATGGCGTGCTTGTAG 552 0.663 MDQPPHHHSSNATISADKPSTPRGGTRHPLFRGVRKRRWGKWVSEIREPRKKSRIWLGSFPAPEMAAKAYDVAAYCLKGRKAQLNFPDEVHRLPPLPSASTPRDIQAAAAKAAHMMMVQAAVATDSPEKSSITSGCDHAADDFWREIELPELLHRKWWTSSGESSPWTETDLPPQQPFTMACL* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01473 183 Pfam AP2 domain 29 79 IPR001471 GO:0003700|GO:0006355
Phac10g01473 183 MobiDBLite consensus disorder prediction 1 20 - -
Phac10g01473 183 FunFam Ethylene-responsive transcription factor 2 29 88 - -
Phac10g01473 183 Gene3D AP2/ERF domain 30 88 IPR036955 GO:0003700|GO:0006355
Phac10g01473 183 ProSiteProfiles AP2/ERF domain profile. 30 87 IPR001471 GO:0003700|GO:0006355
Phac10g01473 183 MobiDBLite consensus disorder prediction 161 175 - -
Phac10g01473 183 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 10 152 - -
Phac10g01473 183 SUPERFAMILY DNA-binding domain 30 89 IPR016177 GO:0003677
Phac10g01473 183 MobiDBLite consensus disorder prediction 161 183 - -
Phac10g01473 183 MobiDBLite consensus disorder prediction 1 33 - -
Phac10g01473 183 PRINTS Ethylene responsive element binding protein signature 31 42 IPR001471 GO:0003700|GO:0006355
Phac10g01473 183 PRINTS Ethylene responsive element binding protein signature 69 89 IPR001471 GO:0003700|GO:0006355
Phac10g01473 183 SMART rav1_2 30 93 IPR001471 GO:0003700|GO:0006355
Phac10g01473 183 CDD AP2 29 88 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01473 Phac-Chr10 37892717 37893850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01473 2 183 AP2-EREBP Transcription Factor Family AT1G01250 53.191 7.70e-51 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac10g01473 AP2 7.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01473 K09286 - gmx:100802845 274.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac10g01473 10 37892717 37893850 Phac10g01473 10 37892717 37893850 ECH