Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01471 ATGAAGATTGAGGTGGGGTTGGGAGGGGTGTGGAATGAGGAAGAGAAAGCGACGGTGGTGGAGGTTTTGGGTCGCGGTGCGTTTGATTACTTGGTGGCGAATTCGGTTTCTAATGAGAATCTGTTAATGGCGTTTGGGAGCGGCGAGAATCTGCAGAACAAGCTTTCGGATCTCGTGGAGCGTCCTAACGCGTCAAACTTCAGTTGGAACTACGCGATCTTCTGGCAAATTTCGCAGTCCAAGTTTGGGGATTGGGTTTTGGGGTGGGGAGATGGGTGTTGTAGGGAACCGAGGGAGGGAGAAGACGGTGGAGAAGCGAGAGAGAAAGGTAGAGGGGTGGTTGCTGATGACGAGAAGGTGCAGGGGATGAGGAAGAGGGTGTTGCAGAAGCTGCACATGACTTTTGGGGGTTCTGACGAGGACAATTATGCTTTTGGGTTGGACCGTGTTACTGACACCGAGATGTTCTTTCTTGCTTCCATGTACTTCTCTTTTCCCCGTGGACTAGGGGGTCCAGGTAAGTGTTTTGCTTCTGGGAAGCATTTGTGGCTCTCGGATGTGTTCAAATCTAGTTTTGATTACTGTGTGAGGTCTTTCTTGGCCAAATCTGCTGGAATTCAGACTGTTGTTTTAGTGCCTACTGATATGGGGGTGGTGGAGATGGGGTCTGTGAGGATGGTGGGTGAGAGTTTTGAGCTTTTGCAGGCTTTGAAGTCTGTGTTTTCTTCACAGGCATCATTGGTCCCTCCCAGGGTCAAGCCAATTGCACCATTGGATTTGGTGAGTGAGAAGAGAGATGAGAATGCAAATGCCCTTTTTTCTAGTGTGCCAATTGGGGATAAGGATAACAATAACAGCAGTAATGGTAATAATAGAGTTGAAGGAATTGGAGTTCCAAAGATTTTTGGACAGGATTTGAACAGTGTGACTCAATTCAGGGAGAAACTTGCTGTGAGGAAAATGGAGGAGAGGCCCAGGGCGTGGGGAGGTCATCCCAATGGGAATACTATTGGTTTTCCGAATGGTATCCATAGTTCTAGTTGGGGGACCGGTCAAGTTGTGAGGCAGGTTGCTCCTCCTGAAATGCATACTCGTAGGTTGGCCAGCTCCGGTACATTGTCTGTGCCTGTGCCTGTGCCAGAGCTGGCCAATGGCACAAGGCATGATTTTGTGCATAACAATTATCAGCAGCAACGGCCGGTTCAGATGCAAATTGATTTCTCAGGAGCCACTTCAAGGGGAGCCACTTCAAGGGCTTCAGGGAGATCAATCATTGCTGAATCAGAGATTTCTGATGTTGAGGCCTCATGCAAGGAGGAGAGAGTGAGTGTTGCTGATGACAGGAGGCCGAGGAAGCGGGGAAGGAAGCCAGCTAATGGAAGGGAGGAACCCCTCAATCATGTGGAAGCAGAGAGGCAAAGGCGGGAGAAGCTGAACCAGCGGTTCTATGCGCTGCGTGCTGTTGTTCCAAATATCTCCAAGATGGACAAGGCATCATTATTGGGTGATGCTATTGCTTACATCAATGAACTTCAAGCGAAACTCAAGACCATGGAGTCTGAGAGAGAGAGATTTGGAAGCACCTCTATGGATGGATCAGCAGTGGAAGCCAATGCAAGAGCAGAAAATCATAGTAATGGAGCTCCTGATGTGGATGTTCAAGCTGCACAAGATGGGGTGGTAGTAAAGAAGAAAAGAACCTTCACGGGTTTGAAGGAAAGTAAAAGAAGCTGA 1734 0.4873 MKIEVGLGGVWNEEEKATVVEVLGRGAFDYLVANSVSNENLLMAFGSGENLQNKLSDLVERPNASNFSWNYAIFWQISQSKFGDWVLGWGDGCCREPREGEDGGEAREKGRGVVADDEKVQGMRKRVLQKLHMTFGGSDEDNYAFGLDRVTDTEMFFLASMYFSFPRGLGGPGKCFASGKHLWLSDVFKSSFDYCVRSFLAKSAGIQTVVLVPTDMGVVEMGSVRMVGESFELLQALKSVFSSQASLVPPRVKPIAPLDLVSEKRDENANALFSSVPIGDKDNNNSSNGNNRVEGIGVPKIFGQDLNSVTQFREKLAVRKMEERPRAWGGHPNGNTIGFPNGIHSSSWGTGQVVRQVAPPEMHTRRLASSGTLSVPVPVPELANGTRHDFVHNNYQQQRPVQMQIDFSGATSRGATSRASGRSIIAESEISDVEASCKEERVSVADDRRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKTMESERERFGSTSMDGSAVEANARAENHSNGAPDVDVQAAQDGVVVKKKRTFTGLKESKRS* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01471 577 MobiDBLite consensus disorder prediction 441 473 - -
Phac10g01471 577 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 51 241 IPR025610 -
Phac10g01471 577 PANTHER MYC 39 563 IPR045084 GO:0003700|GO:0006355
Phac10g01471 577 SMART finulus 468 517 IPR011598 GO:0046983
Phac10g01471 577 Pfam Helix-loop-helix DNA-binding domain 466 512 IPR011598 GO:0046983
Phac10g01471 577 FunFam Transcription factor bHLH13 455 529 - -
Phac10g01471 577 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 462 511 IPR011598 GO:0046983
Phac10g01471 577 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 465 525 IPR036638 GO:0046983
Phac10g01471 577 Coils Coil 501 528 - -
Phac10g01471 577 CDD bHLH_AtAIB_like 459 524 - -
Phac10g01471 577 Gene3D - 455 527 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01471 Phac-Chr10 37826714 37829845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01471 10 575 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G01260 51.635 2.85e-177 512
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac10g01471 bHLH-MYC_N 6.5e-53 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01471 - - gmx:100807078 909.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac10g01471 10 37826714 37829845 Phac10g01471 10 37826714 37829845 ECH