Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac10g01456 | ATGATAGTTAAGCGGACAATGAAAGCCGAAGCGCCGAACCTGAAACGATGTAAGATTGACGGTACCGAGAATGCGATTCAGAAGAAGCGTAGGGTGAACGGGTTGTACTCGCTGGGAGTGCCGGGGGATGCTGAATATTTCAGCAGCGGTTCTGGTTCTTGGAGCAGTGAAGGATCGTATTGGGGTGGTGGTGGTGAGGTTCAGTCCAATTCGAATTCTTTTATGTTCAACCGGAAAATGGTGAAGGAGGCACGTCGTCCTCCGCTTCTGCGGTCCTCTCGTGGACGCGTCCAGAAGCTTCCGTCGAGGTTCAATGACTCGGTTCTTGACGCGGACGGAGACTCGAGCTTTGAAGATAATGATAAGAGTTATGTGGAGGACGGAAGGGGTGGCATTGGTGTGAGTGTGGAGAGGAGTGATAGTGTGTGTTGTTCGTCTAGTGTTGGGAGAAGGACTGGCGTTATGGCTGAGAGTAATACGTCTGGGATTAGTTTCGAGGGTGTTGACCAAAAATCCAATGGGGAGAAGAGGAATGAGGTTTTCAAGCTGGAGGATTTTTCTTTGGGGGATATAGTTTGGGCTAAGTGTGGGAAGAGGTATCCGGCTTGGCCTGCTGTAGTGATTGATCCTGCCTTGGAAGCTCCAGAGTCCGTACTCAGCTGTTGTATTCCCGGCGCGCTCTGCGTGATGTTTTTTGGTTATTCAAAGAACGGAACTCAAAGGGACTATGCGTGGGTGAAGCAGGGAATGGTATTCCCCTTCTCGGAGTTCTTGGACAGGTTTCAGGGGCAGACTCGGTTGTACAAGAGCAAACCTAGTGACTTCCGCATGGCCCTGGAGGAGGCAATGCTGGCAGAAGATGGTGTTCTGGAATCACATTTGGGAAGAGTGGAAGTACCTGATGCAGAAGCTCATCCTGCTCGACTTATGGAGGCTACCTGCTATTATGTTGATGAAGAATACTACGGCCAGGAACAGGTTACAGGGTACTGTGCTGGCTGTGGTCTGATGTTGCCATGCAAAACCATGAAGAAGATTAAGGATTCAAATTGTGCACCACGATTTTATTGTAAACATTGTACCAAGCTACGAAAATCAAAACAATATTGTGGCATTTGCAAAAGGACTTGGCATCATTCAGATGGTGGGAATTGGGTGTGTTGCGATGGATGTAATGTGTGGGTGCATGCTGAGTGTGATAAAATAACCAGCAGACTTTTCAAGGATCTGGAAAATACAGATTACTACTGTCCAGATTGCAAGGGAAAATTCATTAGTAATTTACCAGCATCACAAACATACAAGCCGAGAATCAAATCAATAGAGAATAGCCAAAAATCTATGATACCCGATAGTGTATTGGTGGTGTGCAACGGCATGGAAGGAATATATATCCCAAAGCTTCATCTAGTCATGTGCAATTGTGGCTATTGTGGTTCAAGGAAGCAGACACTCAGTGAATGGGAAAAACATACTGGTTGCAGAGCGAAAAAATGGAAACATAGTGTGAAAGTGAAAAGTACAATGCTACCTCTGGAAAAATGGATGGCTGAGCACATTCCACTAGAGGGAATAACCCAGCAGTTAGATCAGCAGCAGGTACTTGCTTTCTTGCAAGAGAAGTACGAGCCTGTTAATGCAAAATGGACAACGGAAAGGTGTGCTGTTTGCAGATGGGTTGAAGATTGGGAAGATAATAAAATTATTATTTGCAACAGATGTCAAATAGCTGTCCACCAAGAGTGCTATGGGGCAAAAAATGTTAAGGATTTAACTTCTTGGGTTTGCAGAGTATGTGAAACTCCTGATGTTGAGAGAGAGTGTTGCCTCTGCCCAGTAAAAGGTGGTGCTTTAAAGCCAACTGATGTTGAAATGTTGTGGGTTCATGTAACATGTGCTTGGTTTCGACCTCAAGTTGTTTTCCAAAACCATGAGGCCATGGAACCTGCTGTGGGAATCCTTAAAATTCCTCCTAATTCGTTTGTGAAGACTTGTGTGATTTGTAAACAGAGCCATGGTTCCTGTATAACTTGTTGCAAGTGTTCTACATATTTTCATGTGATGTGTGCATCAAGGGCAGGATATACAATGGAATTGCATTCCATGGAGAAGAATGGGTCTCAAATAACGAAGAAGCTAATATATTGTTCAGTTCACAGGGTCCCAAATCCAGATTCAGTACTAGTCATACACACACCCCTGGGGATTTTCTCTCCCAGAACTTCCCTTCAAAATCAGAAAGGATGCTTCAGGGGATCAAGGCTAATTTCATCAAAGAATATAGAGCTTATTGAATCTTCAACCACTGAAAATGAGGTAGTTGAGCCACTGTCTGCTGCTAGATGTCGTGTGTACCGTAGGTCTCCTAATAAGAGAGCCAATGAGCCAATAATTCACTGGCCCAGGGGACCCACCCGTCATTCCCTAGATGCAATAACTCTGTTGAATGGCTTTAAGGAACGTCTTCACCATTTACGGGAAATGGAAAAATTGAGAGTTTGCTTTGGAAAATCAGGCATTCATGGATGGGGCCTCTTTGCTCGTAGAGATATACAAGAAGGAGAGATGGTTGTTGAGTATCGTGGTGTGCATGTAAGGCGTAGTGTTGCTGATCTGAGGGAAGCAAAATATCGTTCGGAAGGCAAAGATTGCTATCTGTTCAAGATTAGCGAGGAAGTGGTAGTTGATGCAACAAACACGGGCAATATTGCACGCTTAATAAACCACTCTTGCATGCCAAACTGCTACGCAAGGATAATGAGTCTGGGTGATCAGGAGAGCCGGATTGTTCTTATTGCCAAGACTAATGTTTCTGCTGGTGAAGAACTAACGTATGACTACTTGTTCGATCCAGATGAGCGGGATGACCTGAAAGTTCCCTGCCTTTGCAAAGCCCCCAATTGTAGGAGATTTATGAATTAG | 2922 | 0.4483 | MIVKRTMKAEAPNLKRCKIDGTENAIQKKRRVNGLYSLGVPGDAEYFSSGSGSWSSEGSYWGGGGEVQSNSNSFMFNRKMVKEARRPPLLRSSRGRVQKLPSRFNDSVLDADGDSSFEDNDKSYVEDGRGGIGVSVERSDSVCCSSSVGRRTGVMAESNTSGISFEGVDQKSNGEKRNEVFKLEDFSLGDIVWAKCGKRYPAWPAVVIDPALEAPESVLSCCIPGALCVMFFGYSKNGTQRDYAWVKQGMVFPFSEFLDRFQGQTRLYKSKPSDFRMALEEAMLAEDGVLESHLGRVEVPDAEAHPARLMEATCYYVDEEYYGQEQVTGYCAGCGLMLPCKTMKKIKDSNCAPRFYCKHCTKLRKSKQYCGICKRTWHHSDGGNWVCCDGCNVWVHAECDKITSRLFKDLENTDYYCPDCKGKFISNLPASQTYKPRIKSIENSQKSMIPDSVLVVCNGMEGIYIPKLHLVMCNCGYCGSRKQTLSEWEKHTGCRAKKWKHSVKVKSTMLPLEKWMAEHIPLEGITQQLDQQQVLAFLQEKYEPVNAKWTTERCAVCRWVEDWEDNKIIICNRCQIAVHQECYGAKNVKDLTSWVCRVCETPDVERECCLCPVKGGALKPTDVEMLWVHVTCAWFRPQVVFQNHEAMEPAVGILKIPPNSFVKTCVICKQSHGSCITCCKCSTYFHVMCASRAGYTMELHSMEKNGSQITKKLIYCSVHRVPNPDSVLVIHTPLGIFSPRTSLQNQKGCFRGSRLISSKNIELIESSTTENEVVEPLSAARCRVYRRSPNKRANEPIIHWPRGPTRHSLDAITLLNGFKERLHHLREMEKLRVCFGKSGIHGWGLFARRDIQEGEMVVEYRGVHVRRSVADLREAKYRSEGKDCYLFKISEEVVVDATNTGNIARLINHSCMPNCYARIMSLGDQESRIVLIAKTNVSAGEELTYDYLFDPDERDDLKVPCLCKAPNCRRFMN* | 974 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac10g01456 | 973 | CDD | PHD_ATX3_4_5_like | 553 | 599 | IPR042011 | - | |
Phac10g01456 | 973 | SMART | PWWP_4 | 186 | 255 | IPR000313 | - | |
Phac10g01456 | 973 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 361 | 424 | IPR013083 | - | |
Phac10g01456 | 973 | ProSiteProfiles | Post-SET domain profile. | 957 | 973 | IPR003616 | - | |
Phac10g01456 | 973 | SUPERFAMILY | FYVE/PHD zinc finger | 367 | 423 | IPR011011 | - | |
Phac10g01456 | 973 | CDD | PWWP_AtATX3-like | 189 | 288 | - | - | |
Phac10g01456 | 973 | Pfam | PHD-finger | 566 | 600 | - | - | |
Phac10g01456 | 973 | FunFam | Histone-lysine N-methyltransferase | 805 | 973 | - | - | |
Phac10g01456 | 973 | Pfam | SET domain | 842 | 947 | IPR001214 | GO:0005515 | |
Phac10g01456 | 973 | SUPERFAMILY | SET domain | 829 | 969 | IPR046341 | - | |
Phac10g01456 | 973 | Pfam | PHD-zinc-finger like domain | 607 | 719 | - | - | |
Phac10g01456 | 973 | Gene3D | - | 177 | 292 | - | - | |
Phac10g01456 | 973 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 603 | 721 | IPR013083 | - | |
Phac10g01456 | 973 | ProSiteProfiles | Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. | 3 | 973 | IPR025780 | - | |
Phac10g01456 | 973 | ProSiteProfiles | PWWP domain profile. | 188 | 257 | IPR000313 | - | |
Phac10g01456 | 973 | SMART | PostSET_3 | 957 | 973 | IPR003616 | - | |
Phac10g01456 | 973 | SMART | PHD_3 | 369 | 421 | IPR001965 | - | |
Phac10g01456 | 973 | SMART | PHD_3 | 553 | 600 | IPR001965 | - | |
Phac10g01456 | 973 | SMART | PHD_3 | 664 | 720 | IPR001965 | - | |
Phac10g01456 | 973 | ProSiteProfiles | Zinc finger PHD-type profile. | 367 | 423 | IPR019787 | - | |
Phac10g01456 | 973 | Gene3D | SET domain | 777 | 973 | IPR046341 | - | |
Phac10g01456 | 973 | PANTHER | PHD FINGER PROTEINS | 81 | 950 | - | - | |
Phac10g01456 | 973 | CDD | PHD_TCF19_like | 370 | 420 | - | - | |
Phac10g01456 | 973 | Pfam | PHD-finger | 369 | 422 | IPR019787 | - | |
Phac10g01456 | 973 | Pfam | PWWP domain | 189 | 285 | IPR000313 | - | |
Phac10g01456 | 973 | SUPERFAMILY | Tudor/PWWP/MBT | 181 | 297 | - | - | |
Phac10g01456 | 973 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 548 | 602 | IPR013083 | - | |
Phac10g01456 | 973 | ProSiteProfiles | Extended PHD (ePHD) domain profile. | 605 | 720 | IPR034732 | - | |
Phac10g01456 | 973 | ProSiteProfiles | Zinc finger PHD-type profile. | 551 | 602 | IPR019787 | - | |
Phac10g01456 | 973 | CDD | SET_SETD1-like | 820 | 969 | - | - | |
Phac10g01456 | 973 | ProSitePatterns | Zinc finger PHD-type signature. | 554 | 599 | IPR019786 | - | |
Phac10g01456 | 973 | SUPERFAMILY | FYVE/PHD zinc finger | 552 | 616 | IPR011011 | - | |
Phac10g01456 | 973 | SMART | set_7 | 831 | 954 | IPR001214 | GO:0005515 | |
Phac10g01456 | 973 | ProSiteProfiles | SET domain profile. | 831 | 948 | IPR001214 | GO:0005515 | |
Phac10g01456 | 973 | FunFam | Histone-lysine N-methyltransferase | 603 | 722 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac10g01456 | Phac-Chr10 | 37655808 | 37664424 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac10g01456 | 554 | 719 | C2H2 Transcription Factor Family | AT3G14740 | 32.948 | 4.16e-21 | 94.4 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | PHD | Phac10g01456 | zf-HC5HC2H_2 | 4.3e-29 | CL0390 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac10g01456 | - | - | gmx:100797346 | 1779.61 |