Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01399 ATGAGCTCTCAGTCACAACCTCAGCAACAGGGCAACCACCAGAACCGAGAAGAAGAGAAGGAAGAAGAAGAAAACCATTTGCTACAATCAGAATGCGAGTCAATACCGTTGTCCTCACCCCATGTAACACCCTCAAACTGGGAACATGCTTACAAAGAAGAAGAAGAAGAGAAAGACACGGTGTATGCAGCCAAGGACAAGGTGCAGATATTTGACTTGGAGTCTTCCGGTGGCGGAGGGTCCACGGCGGTGCCGCCATTTTCGTGGAGGAAGCTGTGGCTGTTCACGGGGCCAGGGTTGTTGATGAGCGTGGCGTTTTTGGACCCGGGGAACCTTGAAGGGGACCTTCAAGCTGGTGCAATTGCAGGGTACTCCTTGCTTTGGTTGTTGATGTGGTCCACCATCATGGGGTTGGTGATACAGCTTCTGTCGGCGAGGCTCGGGGTGGCGACCGGGCGGCACCTGGCGGAGCTGTGCAGGGAGGAGTACTCCAATTGGGCCAGGTTAGTGCTGTGGATCTTGGCTGAACTGGCTCTCATTGCTGCTGATATTCAAGAGGTTATTGGCAGTGCCATTGCTTTCAAGATTCTTAGCCATGGGCTTATCCCCATTTGGGCTGGTGTGGTCATCACAGCCACGGATTGTTTCTTCTTTCTATTTCTGGAGAACTATGGAGTGAGGAAGTTGGAAGGTGTTTTCGCAGTTTTCATTGGAACTATGGGCCTTTCTTTTGCATGGATGTTCTTGGATACAAAACCCAGTGAAGAAGAACTATTGATGGGTCTTTTAATCCCAAGACTTAGTTCAAAAACTCTTCGTCAGGCTGTGGAAATTGTGGGGTGTGTGATAACCCCACATAATGTGTTCCTCCATTCTGCATTGGTACAATCAAGGGACATTGATATCCGTAACAAAGGCCAGGTTCAAGAGGCTCTCAACTACTACTCAATTGAGTCCTCAGTTGCACTTTTAGTGACATTGGTGATCAATCTATGTGTGATAACAGTTTTTGCTAGGGTGTTCTATGGTACAGAACAGGCCAATGGCATAGGATTGGTAAATGCAGGGCAATATCTGGAGGAGAGGTATGGGGGAGGGTTGTTTCCAATTCTCTATATATGGGGTATTGGTTTACTAGCAGCTGGCCAAAGTAGTACCATAACTGGCACATATGCTGGCCAGTTTATAACAGAGGGTTTTCTTAAGCTCAATATAAAGAAGTGGTTGAGGGCATTGATCACTAGAAGTTGTGCAATTGTTCCAACTATGATTTGTGCAATTGCTTTTAATACATCAGAAAGTTCATTGGATACCTTGAATGAATGGCTTAATGTGGTCCAAGCAATACAGATTCCTTTTGCACTTATCCCCCTTCTTACTTTGGTGTCCAAAGAGGAGGTCATGGGGTCCTTCAGAATAGGGCCTATGGTAGAGAAAGTGGCTTGGAGTGTGGCTGTGCTGGTAATATTGGTTTATGGATATATGTTATTAGATTTCTTCCTGGATGAAGTGGATGGAGTATTGTTTGGCTTTCTAGTTTTCCTTGGTGCTTTGGCATGGATTTCATTTATTATATATTTGGTTCAACATAGTGGTGCCATTCCTTCAATCATGGTGAGGTCCCCTAATTCAAGAGGCTTTTTCTCTCTTTCTGGGAACTAA 1662 0.4573 MSSQSQPQQQGNHQNREEEKEEEENHLLQSECESIPLSSPHVTPSNWEHAYKEEEEEKDTVYAAKDKVQIFDLESSGGGGSTAVPPFSWRKLWLFTGPGLLMSVAFLDPGNLEGDLQAGAIAGYSLLWLLMWSTIMGLVIQLLSARLGVATGRHLAELCREEYSNWARLVLWILAELALIAADIQEVIGSAIAFKILSHGLIPIWAGVVITATDCFFFLFLENYGVRKLEGVFAVFIGTMGLSFAWMFLDTKPSEEELLMGLLIPRLSSKTLRQAVEIVGCVITPHNVFLHSALVQSRDIDIRNKGQVQEALNYYSIESSVALLVTLVINLCVITVFARVFYGTEQANGIGLVNAGQYLEERYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFITEGFLKLNIKKWLRALITRSCAIVPTMICAIAFNTSESSLDTLNEWLNVVQAIQIPFALIPLLTLVSKEEVMGSFRIGPMVEKVAWSVAVLVILVYGYMLLDFFLDEVDGVLFGFLVFLGALAWISFIIYLVQHSGAIPSIMVRSPNSRGFFSLSGN* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01399 553 PRINTS Natural resistance-associated macrophage protein signature 275 298 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phac10g01399 553 PRINTS Natural resistance-associated macrophage protein signature 382 401 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phac10g01399 553 PRINTS Natural resistance-associated macrophage protein signature 410 427 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phac10g01399 553 PRINTS Natural resistance-associated macrophage protein signature 201 220 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phac10g01399 553 PRINTS Natural resistance-associated macrophage protein signature 171 197 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phac10g01399 553 PRINTS Natural resistance-associated macrophage protein signature 226 247 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phac10g01399 553 PRINTS Natural resistance-associated macrophage protein signature 444 463 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phac10g01399 553 Pfam Natural resistance-associated macrophage protein 113 474 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phac10g01399 553 Hamap Divalent metal cation transporter MntH [mntH]. 77 500 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phac10g01399 553 MobiDBLite consensus disorder prediction 13 29 - -
Phac10g01399 553 NCBIfam Nramp family divalent metal transporter 97 466 - -
Phac10g01399 553 Coils Coil 13 33 - -
Phac10g01399 553 MobiDBLite consensus disorder prediction 1 54 - -
Phac10g01399 553 MobiDBLite consensus disorder prediction 31 45 - -
Phac10g01399 553 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 20 529 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phac10g01399 553 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 90 468 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01399 Phac-Chr10 37080306 37084362 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01399 55 531 Inorganic Solute Cotransporters AT1G47240 73.278 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01399 K21398 - gmx:100801411 935.636