Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01372 ATGGGAAACAGTGAGGAAGGGAAATCTGTTAAAACTGGAAGTCCTTCTTCACCAGCTACAACTGAACAGACCAATCAGACAAACCAGCCTAACTTTCATGTCTATCCTGATTGGGCTGCCATGCAGTATTATGGGCCGAGAGTCAACATTCCTCCATACTTCAACTCGGCTGTGGCTTCTGGTCATGCTCCACACCCATACATGTGGGGTCCGCCACAGCCTATGATGCCACCTTATGGGCCACCATATGCAGCATTTTATTCTCCTGGAGGGGTTTATACTCACCCTGCAGTTGCTATTGGGCCACATTCACACGGTCAAGGAGTTCCATCTCCACCTGCTGCTGGGACTCCTTCAAGTGTAGATTCACCAACAAAATTATCTGGAAATACTGATCAAGGGTTAATGAAGAAATTGAAAGGGTTTGATGGGCTTGCAATGTCAATAGGCAATTGCAATGCTGAGAGTGCTGAGCTTGGAGCTGAAAACAGGCTGTCGCAGAGTGTGGATACTGAGGGTTCTAGCGATGGAAGTGATGGCAACACTGCAGGGGCCAATCAAACAAAAATGAAAAGAAGCCGAGAGGAAACATCAACCACTGATGGAGAAGGGAAAACTGAGACACAAGATGGGCCAGTTTCCAAAGAGACTGCATCTTCGAAAATTATTATGTCTGCTACACCAGCTAGTGTTGCAGGAAAGTTAGTTGGTCCTGTAATTTCTTCAGGTATGACCACAGCACTGGAGCTTAGGAAACCTTTGACTGTTCATTCTAAGGAAAATCCCACGAGTGCCCCACAACCTTGTGCAGCTGTGCCTCCTGAAGCTTGGTTACAGAATGAGCGTGAGCTGAAACGGGAGAGGAGGAAACAATCTAACCGTGAATCTGCTAGAAGGTCCAGGCTGAGGAAGCAGGCCGAGACTGAAGAATTGGCACGAAAAGTTGAGATGTTAACTGCTGAAAATGTGTCACTGAAGTCAGAAATAACTCAATTGACTGAAGGTTCTGAGCAGATGAGGATGGAAAATTCTGCATTGAGGGTATTGCAATAG 1053 0.4644 MGNSEEGKSVKTGSPSSPATTEQTNQTNQPNFHVYPDWAAMQYYGPRVNIPPYFNSAVASGHAPHPYMWGPPQPMMPPYGPPYAAFYSPGGVYTHPAVAIGPHSHGQGVPSPPAAGTPSSVDSPTKLSGNTDQGLMKKLKGFDGLAMSIGNCNAESAELGAENRLSQSVDTEGSSDGSDGNTAGANQTKMKRSREETSTTDGEGKTETQDGPVSKETASSKIIMSATPASVAGKLVGPVISSGMTTALELRKPLTVHSKENPTSAPQPCAAVPPEAWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVEMLTAENVSLKSEITQLTEGSEQMRMENSALRVLQ* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01372 350 CDD bZIP_plant_GBF1 286 334 IPR045314 GO:0003700|GO:0006355
Phac10g01372 350 MobiDBLite consensus disorder prediction 204 219 - -
Phac10g01372 350 MobiDBLite consensus disorder prediction 1 32 - -
Phac10g01372 350 MobiDBLite consensus disorder prediction 113 132 - -
Phac10g01372 350 Gene3D - 284 339 - -
Phac10g01372 350 MobiDBLite consensus disorder prediction 160 188 - -
Phac10g01372 350 MobiDBLite consensus disorder prediction 189 203 - -
Phac10g01372 350 FunFam G-box binding factor 3 284 339 - -
Phac10g01372 350 SUPERFAMILY Leucine zipper domain 284 339 IPR046347 GO:0003700|GO:0006355
Phac10g01372 350 MobiDBLite consensus disorder prediction 279 309 - -
Phac10g01372 350 Coils Coil 308 328 - -
Phac10g01372 350 SMART brlzneu 281 345 IPR004827 GO:0003700|GO:0006355
Phac10g01372 350 MobiDBLite consensus disorder prediction 103 134 - -
Phac10g01372 350 Pfam bZIP transcription factor 281 343 IPR004827 GO:0003700|GO:0006355
Phac10g01372 350 Pfam Disordered region downstream of MFMR 132 262 - -
Phac10g01372 350 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 283 346 IPR004827 GO:0003700|GO:0006355
Phac10g01372 350 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 347 IPR044827 GO:0003700|GO:0006355|GO:0043565
Phac10g01372 350 MobiDBLite consensus disorder prediction 160 219 - -
Phac10g01372 350 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 288 303 IPR004827 GO:0003700|GO:0006355
Phac10g01372 350 Pfam G-box binding protein MFMR 1 98 IPR012900 -
Phac10g01372 350 MobiDBLite consensus disorder prediction 257 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01372 Phac-Chr10 36698230 36703114 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01372 1 346 bZIP Transcription Factor Family AT2G46270 50.843 1.55e-94 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac10g01372 MFMR_assoc 1.1e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01372 K09060 - gmx:547789 562.377