Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01314 ATGGAAGCAGATTGGGATCTCCACGCGGTCGTCAGAAGCTGCACCACCACTTCCTACGCCGCCACCACCATCGCTTCCACCACCTCATCTTCTGGCTTTGGGGCTTCTGCCCCACCTTCTACTTCCTGCAGCTTCTTCTCGGCTTACAACCCTGCTGTACAAGGAGACCAAGTGATGTCGGAGAACCCCTACGAAGCAAGGCCTTCCATTGAAGAGCTTCAGGAGCTTTGCAAGCCTTTCTTCCTCAAACCACAGCCTCACACCTTCCAACCCTCTTCTCCTCTCTCTTCTTCCTTTTCTTACTCGTCAGTGCCCAAATCACCTAGCAGCCAGCAGGAACAGAAGCAGCCTCCCCATGCCGGTTCTGCCTCCACCCCAAGAACCAAAAGAAGGAAGAATCAGGTTAAGAAGGTTTGTGAAGTAGCAGCTGAGAATCTCTCCTCAGACATATGGGCATGGAGGAAATATGGACAGAAACCCATCAAAGGGTCACCATATCCAAGGGGATATTACAGATGCAGCAGCTCAAAAGGATGTTTAGCAAGGAAACAAGTGGAGAGGAAAAGATCCGACCCAACAATGTTCATAGTCACATACACAGGTGAACACAACCACCCTGCTCCTACTCATAAGAGCTCCCTTGCCGGCTCCACTCGCTACAAACCTCAGATTGTTGGAGACACAGCCGCCACAAAACCGGTTTCTCCAGCCACCTCATCAGAGGTGGCACAGCACAGTACAAAGTCAGAGTGCACAGAAGAGGACTTGGAAGATCTGATGAAAGATGATGAAGAACCAAATGAATTTGACACAACAGAAACAGTGGTAACAGATGATTTCTTTGAAGGGTTAGAGGAACTGACAGGGTCTGCCACTGACTCCTTTACAGCTAGTAGTAGCATTGATCGGTGGGCACTGGCCAATAATGCTACCACTGCCGCTGGTGGTAGCTGA 954 0.5021 MEADWDLHAVVRSCTTTSYAATTIASTTSSSGFGASAPPSTSCSFFSAYNPAVQGDQVMSENPYEARPSIEELQELCKPFFLKPQPHTFQPSSPLSSSFSYSSVPKSPSSQQEQKQPPHAGSASTPRTKRRKNQVKKVCEVAAENLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERKRSDPTMFIVTYTGEHNHPAPTHKSSLAGSTRYKPQIVGDTAATKPVSPATSSEVAQHSTKSECTEEDLEDLMKDDEEPNEFDTTETVVTDDFFEGLEELTGSATDSFTASSSIDRWALANNATTAAGGS* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01314 317 Gene3D WRKY domain 131 201 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac10g01314 317 ProSiteProfiles WRKY domain profile. 142 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac10g01314 317 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 4 290 IPR044810 GO:0003700
Phac10g01314 317 MobiDBLite consensus disorder prediction 228 270 - -
Phac10g01314 317 SMART WRKY_cls 147 207 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac10g01314 317 MobiDBLite consensus disorder prediction 232 246 - -
Phac10g01314 317 MobiDBLite consensus disorder prediction 256 270 - -
Phac10g01314 317 FunFam WRKY transcription factor 22 131 201 - -
Phac10g01314 317 SUPERFAMILY WRKY DNA-binding domain 144 208 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac10g01314 317 MobiDBLite consensus disorder prediction 88 135 - -
Phac10g01314 317 Pfam WRKY DNA -binding domain 149 206 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac10g01314 317 MobiDBLite consensus disorder prediction 88 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01314 Phac-Chr10 35724001 35725788 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01314 1 316 WRKY Transcription Factor Family AT4G01250 45.833 7.79e-80 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac10g01314 WRKY 6.6e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01314 K13425 - gmx:100815829 397.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac10g01314 10 35724001 35725788 Phac7g01151 7 7241470 7243256 ECH
Phac10g01314 10 35724001 35725788 Phac10g01314 10 35724001 35725788 ECH
Phac10g01314 10 35724001 35725788 Phac8g00845 8 5493531 5495817 ECH
Phac10g01931 10 41587764 41594157 Phac10g01314 10 35724001 35725788 ECH
Phac8g00845 8 5493531 5495817 Phac10g01314 10 35724001 35725788 PCT