Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01302 ATGGTGTCGGTGAACCCAAACCCCGCGCAAGGCTTCTACTTCTTCGATCCTTCCAATATGACCCTTCCCGGCGTTAATTCTCTTCCGCCGCCACCGCCGCCGCCGCAGACTCCCGCCGCTTCCGTCGCCTTGGAGGATCCAAATAAGAAGATCCGGAAACCCTACACAATTACCAAGTCCAGGGAGAGCTGGACCGAGCAGGAACACGACAAATTTCTAGAAGCTCTCCAATTATTTGATCGGGACTGGAAAAAGATTGAAGCATTTGTTGGTTCAAAAACTGTCATCCAGATAAGAAGTCATGCACAGAAGTATTTTCTTAAAGTTCAGAAGAATGGAACAAGTGAACATGTTCCTCCTCCTCGGCCAAAGAGAAAAGCCACTCACCCATACCCTCAAAAGGCTCCTAAAATCACTCCTACTGTATCCCAAGTTATGGGCCCACTGCAACCTTCATCTGCTTTCATTGAGCCTGCATATATTTATAGCCCGGATTCTTCATCTGTTCTTGGAACTCCATTAACCAACATGCCTTTGTCGTCTTGGAACTATAATGCTAAACCACCAGTCAATGTGCCACAAGTGACTAGAGATGACATGGGATTGACTGGAGCGGCACAAACTGTTCCTCTCAACTGTTGCTATAGCAGTAGTAATGAGAACACCCCTCCAACATGGTCAAGTAGCAAAAAAATTCATCAAGGTGGCCAAGGCAAGCCAATTAAAGTAATGCCAGATTTTGCTCAAGTCTACAGCTTCCTTGGCAGTGTTTTTGATCCAAATTCTACTAATCACCAACAGAAACTAAGACAGATGGACCCAATAAATGTGGAAACGGTACTGTTGTTGATGAGAAATCTCTCAGTGAATTTAATGAGTCCAGAGTTTGAGGATCATGTAAGTTTTTTTCCAACAGTAAGCATTTTTTCTTGTTATATTCCGACTGATATATTATTGAACCCATCATATTAG 972 0.4383 MVSVNPNPAQGFYFFDPSNMTLPGVNSLPPPPPPPQTPAASVALEDPNKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKATHPYPQKAPKITPTVSQVMGPLQPSSAFIEPAYIYSPDSSSVLGTPLTNMPLSSWNYNAKPPVNVPQVTRDDMGLTGAAQTVPLNCCYSSSNENTPPTWSSSKKIHQGGQGKPIKVMPDFAQVYSFLGSVFDPNSTNHQQKLRQMDPINVETVLLLMRNLSVNLMSPEFEDHVSFFPTVSIFSCYIPTDILLNPSY* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01302 323 SMART sant 60 108 IPR001005 -
Phac10g01302 323 Gene3D - 64 111 - -
Phac10g01302 323 MobiDBLite consensus disorder prediction 23 52 - -
Phac10g01302 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Phac10g01302 323 Pfam Myb-like DNA-binding domain 61 106 IPR001005 -
Phac10g01302 323 CDD SANT 63 106 IPR001005 -
Phac10g01302 323 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Phac10g01302 323 PANTHER SWI/SNF COMPLEX-RELATED 36 292 - -
Phac10g01302 323 SUPERFAMILY Homeodomain-like 55 111 IPR009057 -
Phac10g01302 323 FunFam protein REVEILLE 6 isoform X1 63 111 - -
Phac10g01302 323 MobiDBLite consensus disorder prediction 112 138 - -
Phac10g01302 323 MobiDBLite consensus disorder prediction 24 40 - -
Phac10g01302 323 ProSiteProfiles SANT domain profile. 59 112 IPR017884 -
Phac10g01302 323 NCBIfam myb-like DNA-binding domain, SHAQKYF class 59 108 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01302 Phac-Chr10 35525807 35532925 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phac10g01302 Myb_DNA-binding 2.7e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01302 - - gmx:778090 542.347