Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01301 ATGTCAGTGTACGACGCAGCTTTCGTCGACACAGAGCTTTCCAAACGCACTTCCATCTTCGGCCTCCGTCTCTGGGTCGTCATCGGCATCCTCGTCGGATCCCTCATCGTCATAGTCCTCTTTCTCCTGTCCCTCTGCCTCACCTCCCGCCGCCGCCACCACCACCACCACAAAACTCCCCACCGCCGCAGCGCCGCCGCCGTCTCCACGCCGCCCATCTCCAAGGAAATTCTGGAGATCGTTCACGTTCCCATGCCGCCAGAAGCCGTCAACCTCCCGCCTCCGAAGGCGGAGCCCCGCGCCGCCGCCGTACTGTACTCCAGTGGGGAGAGTAGGGGAACTGGGAGCTTGTGCGAAACGGCGTCGTCACTGGGGAGCGGGAGTGTGGGCCCCGAAGTGTCGCATCTGGGGTGGGGGAGGTGGTACACGCTGAGGGAACTCGAAGCTGCGACTAATGGGTTGTGTGAAGAGAACGTGATTGGTGAAGGTGGCTATGGAATCGTGTATCGTGGGTTGTTACCTGATGGAAACAAGGTTGCTGTTAAGAACCTTTTGAATAATAAGGGCCAAGCTGAGAGAGAATTTAAAGTAGAGGTAGAAGTAATTGGTCGTGTGCGGCATAAGAATCTTGTAAGGTTGCTTGGATACTGTGTTGAGGGGGCGTACAGGATGCTCGTATATGAATATGTTGACAATGGGAATCTAGAACAGTGGCTGCACGGGGATGTTGGAACTGTAAGCCCTATAACTTGGGATATCCGAATGAACATTATATTGGGCACGGCAAAAGGACTGGCCTATCTTCATGAGGGTCTTGAACCCAAAGTTGTCCACCGAGACGTGAAATCAAGCAACATACTGCTTGATCGCCAATGGAACCCAAAGGTTTCTGATTTTGGGCTTGCAAAGCTTTTGTCTGCTGATCATAGTTATGTCACTACTCGAGTGATGGGCACCTTTGGTTATGTTGCACCTGAGTATGCCTGCACTGGAATGCTGACTGAGAAGAGTGATGTGTATAGTTTTGGGATACTTATCATGGAAATAATTACGGGAAGAAGTCCTGTTGATTATAGTAGACCACAAGGAGAGGTTAATTTAATAGAGTGGCTGAAAAGTATGGTTGGGAATCGAAAATCTGAGGAAGTAGTTGATCCTAAGCTTGCTGAAAAGCCATCTTCAAGGGCTCTTAAACGGGCTCTTTTGGTTGCTCTTCGATGTGTCGATCCTGATGCTGCAAAGAGGCCTAAAATAGGACATGTTATCCACATGCTCGAGGCTGAGGACCTCTTATTCCGTGATGAACGAAGGACTGAGGGAGAATCTTCCCGTTCTCATCGTGATTATCAACTGGAGCATAAAGGCTCTGGATTAGATAAAAGGCAGACAGGTGGAGAGATCAACAATCAGATTGAAGATGACAGTACTAGTAGTAGTAGATATCACCATCAGCCTTCTAGATGGAGATAA 1470 0.498 MSVYDAAFVDTELSKRTSIFGLRLWVVIGILVGSLIVIVLFLLSLCLTSRRRHHHHHKTPHRRSAAAVSTPPISKEILEIVHVPMPPEAVNLPPPKAEPRAAAVLYSSGESRGTGSLCETASSLGSGSVGPEVSHLGWGRWYTLRELEAATNGLCEENVIGEGGYGIVYRGLLPDGNKVAVKNLLNNKGQAEREFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLEQWLHGDVGTVSPITWDIRMNIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRQWNPKVSDFGLAKLLSADHSYVTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMEIITGRSPVDYSRPQGEVNLIEWLKSMVGNRKSEEVVDPKLAEKPSSRALKRALLVALRCVDPDAAKRPKIGHVIHMLEAEDLLFRDERRTEGESSRSHRDYQLEHKGSGLDKRQTGGEINNQIEDDSTSSSRYHHQPSRWR* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01301 489 SMART serkin_6 154 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g01301 489 MobiDBLite consensus disorder prediction 436 489 - -
Phac10g01301 489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Phac10g01301 489 FunFam Putative receptor-like serine/threonine-protein kinase 230 440 - -
Phac10g01301 489 Pfam Protein kinase domain 157 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g01301 489 Gene3D Transferase(Phosphotransferase) domain 1 230 441 - -
Phac10g01301 489 MobiDBLite consensus disorder prediction 436 460 - -
Phac10g01301 489 FunFam Probable serine/threonine-protein kinase At1g01540 134 229 - -
Phac10g01301 489 Gene3D Phosphorylase Kinase; domain 1 136 229 - -
Phac10g01301 489 PANTHER OS01G0323000 PROTEIN 8 446 - -
Phac10g01301 489 ProSitePatterns Protein kinases ATP-binding region signature. 160 182 IPR017441 GO:0005524
Phac10g01301 489 ProSiteProfiles Protein kinase domain profile. 154 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g01301 489 SUPERFAMILY Protein kinase-like (PK-like) 132 426 IPR011009 -
Phac10g01301 489 CDD STKc_IRAK 160 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01301 Phac-Chr10 35516319 35520652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01301 26 426 Trihelix Transcription Factor Family AT5G38560 41.162 3.03e-94 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Phac10g01301 Pkinase 2.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01301 - - gmx:100777348 785.408