Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01288 ATGGCAGCTGTTAGGGCTTCCTCTGTTAGACGAATAGGAAGCACAATCAAGGTTTCTTTCAATATGGAATTAGTTCAGCGCTGTCACTATCACCATAGTGTCTGTGTCAACCTTGCAAGGTTGCCAAGTGATTCACCGAGTCATCCTTATTACAAAAGAGAGTTACAGTCTGCTAAGAATCAGTTCAGTAATTTGGCTTCTGAATCATTTGGAAGCAGTCACCAATTTGGTACTAGAGCCAATTTATCGTTTAAACCTGCATTCTCTAGCTATTGTTTTCGGAGTGCCCTTCCTTTTGCTTCCGCGAGCCACGTGTTGAATCGCCGATCTTATTCGTCGACGGTGGGTGGTGATAAAGGAAGTAGAGATGCTGGTACAGAAGTCGCTGCTGGTTCTGGTGCGAGTGACATGAATATCACTGGTGATTCTGTTGTTGGGGGTGATTGGGCTGAGAGGATTAAAGATGGTTGGAAGAGTGTGGTAGAGTCAGCATCATATGCTGGGGAAAAGGTTAAAGCAACATCTGATGATCTCACTCCATATGCTCAGCAGTTGCTTGATTCACACCCATATTTAGACAAGGTGGTTATTCCAGTTGGTGGTACTTTAACTGCTACTCTAATTGCTTGGTTCTTGATGCCTATGATTTTGAGGAAATTTCACAGATATGCAATGCAAGGTCCCGTTTCTCTATTGCCAGCAAGCATATCTGGAGATCCAGTTCCTTATGAGAAAAGCTTTTGGGGTGCCCTGGAGGATCCTGTGCGATATTTAGTTACCTTCATGGCATTCTCACAAATTGGTGTAATGGTAGCTCCAACAACTATAACCGCAGAATATCTTGCACCAGTTTGGAGGGGTGCAGTGATAGTTTCGTTTGTATGGTTTTTGCATAGATGGAAAACAAACGTTTTTGCCCGGACATTAACCAGTCAAAGTTTACTTGGACTTGATAGGGAGAAAGTGCTCGCTCTAGACAAAATCTCATCTATTGGTCTATTTGTGATTGGTATAATGGCTTTTGCTGAGGCTTGTGGTGTGGCCGTGCAATCTATTGTTACTGTTGGTGGTATAGGAGGAGTGGCTACTGCTTTTGCTGCCAAGGACATTCTTGGCAACGTGTTTAGTGGTTTATCTATGCAGTTTTCTAAGCCTTTTTCAGTTGGAGATACAATAAAAGTATGTTGA 1188 0.4293 MAAVRASSVRRIGSTIKVSFNMELVQRCHYHHSVCVNLARLPSDSPSHPYYKRELQSAKNQFSNLASESFGSSHQFGTRANLSFKPAFSSYCFRSALPFASASHVLNRRSYSSTVGGDKGSRDAGTEVAAGSGASDMNITGDSVVGGDWAERIKDGWKSVVESASYAGEKVKATSDDLTPYAQQLLDSHPYLDKVVIPVGGTLTATLIAWFLMPMILRKFHRYAMQGPVSLLPASISGDPVPYEKSFWGALEDPVRYLVTFMAFSQIGVMVAPTTITAEYLAPVWRGAVIVSFVWFLHRWKTNVFARTLTSQSLLGLDREKVLALDKISSIGLFVIGIMAFAEACGVAVQSIVTVGGIGGVATAFAAKDILGNVFSGLSMQFSKPFSVGDTIKVC* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01288 395 Pfam Mechanosensitive ion channel 327 394 IPR006685 GO:0016020|GO:0055085
Phac10g01288 395 Gene3D - 280 384 - -
Phac10g01288 395 SUPERFAMILY Mechanosensitive channel protein MscS (YggB), transmembrane region 282 368 IPR011014 GO:0016020
Phac10g01288 395 PANTHER YNAI-RELATED MECHANOSENSITIVE ION CHANNEL 149 394 - -
Phac10g01288 395 MobiDBLite consensus disorder prediction 112 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01288 Phac-Chr10 35387117 35392830 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01288 96 393 Mechanosensitive Ion Channel Family AT4G00290 58.389 2.24e-117 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01288 K22047 - gmx:100789047 675.241