Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01287 ATGAGACAAGCTGGTGCATATTCAGGGTTACTGTGTGGAGGGGTATCAGGAAGGACAGGACCCCACCCTCTGCCCCTGGCAAGGATCAAGAAGATCATGAAGAAGTCAGGGGATGATGTTAAAATGATATCAGGGGAGGCTCCAATTATTTTCTCCAAGGCTTGTGAGCTCTTCATTGAGGAACTTACTAGAAGGTCCTGGATCATGGCCATCCAAGGCAAAAGGAGGACTTTGCACAAAGAGGACTTGACCTCTGCAGTTATAGCCACTGATCTATTTGACTTTTTGATCACTTTGGTTTCCAATTCTGACAGCCATCCACTTGGTGTCACCACCACCACTACCACGGAGGTTGATCATCTCCCTGTTATGCAGTAA 378 0.4709 MRQAGAYSGLLCGGVSGRTGPHPLPLARIKKIMKKSGDDVKMISGEAPIIFSKACELFIEELTRRSWIMAIQGKRRTLHKEDLTSAVIATDLFDFLITLVSNSDSHPLGVTTTTTTEVDHLPVMQ* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01287 125 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 22 104 - -
Phac10g01287 125 SUPERFAMILY Histone-fold 18 96 IPR009072 GO:0046982
Phac10g01287 125 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 24 87 IPR003958 -
Phac10g01287 125 FunFam Nuclear transcription factor Y subunit C-3 15 101 - -
Phac10g01287 125 Gene3D Histone, subunit A 15 102 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01287 Phac-Chr10 35385343 35385932 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01287 22 100 CCAAT-HAP5 Transcription Factor Family AT3G48590 64.557 1.07e-30 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Phac10g01287 CBFD_NFYB_HMF 4.9e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01287 - - ccaj:109817175 205.297