Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01269 ATGAGCATCAGTTCATACAACATAGTACAAAAGAAAGAACCTGGCATTGTGAAGTTCACCATGGAGGAAATCTACCAAGTCACAAGAAATTTCTCCCCTTCTTTCAAGATTGGCCAAGGTGGTTTTGGTGCTGTGTACAAGGCAAAACTCCTGGATGGGTCTGTTGTTGCAGTAAAGCGTGCTAAGAAGAGTCTATATGAGAAACATTTGGGGGTGGAGTTCCAGAGCGAGATCCAAACACTATCCCGGGTGGAACATTTGAACTTGGTCAAGTTTTATGGATATTTGGAGCAAGGGGATGAAAGGCTCATTGTCGTTGAGTATGTTCCAAATGGAACCCTCAGAGAACATTTAGATTGCATTCATGGAAGCGTTCTGGACCTTTCTGCACGTCTGGAAGTAGCAATTGATGTTTCTCATGCTATCACCTATCTTCATATGTATATAGATCATCCTATCATTCATAGAGACATAAAATCTTCGAACATTCTTCTCACTGAACATTTTCGAGCTAAAGTAGCAGACTTTGGTTTTGCTAGACAAGCCCCAGACAGTGACTCTGGCATGACCCATGTTTCCACCCAAGTCAAAGGAACAGCTGGCTACTTGGATCCTGAATATCTGAAAACTTATCAACTAACTGAAAAGAGTGATGTGTATTCATTTGGAGTTTTGCTTGTTGAACTTGTCACCGGCAGACGTCCCATTGAACCAAAATTTGAACTCAAGGAGAGAATAACGGCAAAGTGGGCTATGAAGAGGTTCATGGATGAAGATGCTATCTCGGTCTTGGACCCAAGACTGGATCAGACTTCTGCAAACACTTTGGCACTGCAAAAGATTCTGGAGCTAGCTTTACAGTGCTTGGCTCCACGTAGACAAAACAGGCCTACTATGAAAAGATGTGCCGAGATCCTTTGGGCCATCCGCAAGGATTTCAGAGAGGAGTTATCAGCTTCAAACTTTCACTCATTTTCCACTACTTCCCAAAGGAGCACCTCACTGAGAGAGTGA 1014 0.431 MSISSYNIVQKKEPGIVKFTMEEIYQVTRNFSPSFKIGQGGFGAVYKAKLLDGSVVAVKRAKKSLYEKHLGVEFQSEIQTLSRVEHLNLVKFYGYLEQGDERLIVVEYVPNGTLREHLDCIHGSVLDLSARLEVAIDVSHAITYLHMYIDHPIIHRDIKSSNILLTEHFRAKVADFGFARQAPDSDSGMTHVSTQVKGTAGYLDPEYLKTYQLTEKSDVYSFGVLLVELVTGRRPIEPKFELKERITAKWAMKRFMDEDAISVLDPRLDQTSANTLALQKILELALQCLAPRRQNRPTMKRCAEILWAIRKDFREELSASNFHSFSTTSQRSTSLRE* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01269 337 Pfam Protein kinase domain 36 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g01269 337 CDD STKc_IRAK 37 306 - -
Phac10g01269 337 PIRSF ILK 9 324 - -
Phac10g01269 337 SUPERFAMILY Protein kinase-like (PK-like) 7 309 IPR011009 -
Phac10g01269 337 Gene3D Transferase(Phosphotransferase) domain 1 109 331 - -
Phac10g01269 337 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 109 320 - -
Phac10g01269 337 Gene3D Phosphorylase Kinase; domain 1 2 108 - -
Phac10g01269 337 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Phac10g01269 337 ProSiteProfiles Protein kinase domain profile. 31 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g01269 337 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 2 3 108 - -
Phac10g01269 337 PANTHER OS01G0750732 PROTEIN 4 320 - -
Phac10g01269 337 SMART serkin_6 31 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g01269 337 ProSitePatterns Protein kinases ATP-binding region signature. 37 63 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01269 Phac-Chr10 35087687 35091468 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01269 19 299 Receptor kinase-like Gene Family AT1G79620 46.667 3.35e-71 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Phac10g01269 Pkinase 1.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01269 - - gmx:100792034 620.157