Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01268 ATGACTTCTCCATATATCCCTCGCCGGCGATCCAGCTCCGACCATAGCAGAACGCCGGGAAGAGTGCCCCCTTCTCCGGGATACGCCTCCTCCGAGCTCAGCACCTCCACAGTCTCAGCGCGCCAGAACCCCGTCTCCGCCGCCGCAAGGTTCTTCACCGGAATGTTCACCGCGTGCTTATCGCCGCCGGAATTGGACAACTCCAAGAGCATCGGGGATTCCGAGGAGTTTAAGTCTTCTTCCACTGCATCGAATGGTTCAAGAGCTGGTAGTAGGAGAGGGCGTGCCTCAAATGGAAGTATGAGCATCAGTTCATACAACATAGTACAAAAGAAAGAACCTGGCATTGTGAAGTTCACCATGGAGGAAATCTACCAAGTCACAAGAAATTTCTCCCCTTCTTTCAAGATTGGCCAAGGTGGTTTTGGTGCTGTGTACAAGGCAAAACTCCTGGATGGGTCTGTTGTTGCAGTAAAGCGTGCTAAGAAGAGTCTATATGAGAAACATTTGGGGGTGGAGTTCCAGAGCGAGATCCAAACACTATCCCGGGTGGAACATTTGAACTTGGTCAAGTTTTATGGATATTTGGAGCAAGGGGATGAAAGGCTCATTGTCGTTGAGTATGTTCCAAATGGAACCCTCAGAGAACATTTAGATTGCATTCATGGAAGCGTTCTGGACCTTTCTGCACGTCTGGAAGTAGCAATTGATGTTTCTCATGCTATCACCTATCTTCATATGTATATAGATCATCCTATCATTCATAGAGACATAAAATCTTCGAACATTCTTCTCACTGAACATTTTCGAGCTAAAGTAGCAGACTTTGGTTTTGCTAGACAAGCCCCAGACAGTGACTCTGGCATGACCCATGTTTCCACCCAAGTCAAAGGAACAGCTGGCTACTTGGATCCTGAATATCTGAAAACTTATCAACTAACTGAAAAGAGTGATGTGTATTCATTTGGAGTTTTGCTTGTTGAACTTGTCACCGGCAGACGTCCCATTGAACCAAAATTTGAACTCAAGGAGAGAATAACGGCAAAGTGGGCTATGAAGAGGTTCATGGATGAAGATGCTATCTCGGTCTTGGACCCAAGACTGGATCAGACTTCTGCAAACACTTTGGCACTGCAAAAGATTCTGGAGCTAGCTTTACAGTGCTTGGCTCCACGTAGACAAAACAGGCCTACTATGAAAAGATGTGCCGAGATCCTTTGGGCCATCCGCAAGGATTTCAGAGAGGAGTTATCAGCTTCAAACTTTCACTCATTTTCCACTACTTCCCAAAGGAGCACCTCACTGAGAGAGTGA 1314 0.4658 MTSPYIPRRRSSSDHSRTPGRVPPSPGYASSELSTSTVSARQNPVSAAARFFTGMFTACLSPPELDNSKSIGDSEEFKSSSTASNGSRAGSRRGRASNGSMSISSYNIVQKKEPGIVKFTMEEIYQVTRNFSPSFKIGQGGFGAVYKAKLLDGSVVAVKRAKKSLYEKHLGVEFQSEIQTLSRVEHLNLVKFYGYLEQGDERLIVVEYVPNGTLREHLDCIHGSVLDLSARLEVAIDVSHAITYLHMYIDHPIIHRDIKSSNILLTEHFRAKVADFGFARQAPDSDSGMTHVSTQVKGTAGYLDPEYLKTYQLTEKSDVYSFGVLLVELVTGRRPIEPKFELKERITAKWAMKRFMDEDAISVLDPRLDQTSANTLALQKILELALQCLAPRRQNRPTMKRCAEILWAIRKDFREELSASNFHSFSTTSQRSTSLRE* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01268 437 Gene3D Transferase(Phosphotransferase) domain 1 209 431 - -
Phac10g01268 437 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 2 89 208 - -
Phac10g01268 437 MobiDBLite consensus disorder prediction 67 100 - -
Phac10g01268 437 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 209 420 - -
Phac10g01268 437 Gene3D Phosphorylase Kinase; domain 1 92 208 - -
Phac10g01268 437 MobiDBLite consensus disorder prediction 1 36 - -
Phac10g01268 437 SMART serkin_6 131 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g01268 437 ProSiteProfiles Protein kinase domain profile. 131 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g01268 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Phac10g01268 437 ProSitePatterns Protein kinases ATP-binding region signature. 137 163 IPR017441 GO:0005524
Phac10g01268 437 SUPERFAMILY Protein kinase-like (PK-like) 107 409 IPR011009 -
Phac10g01268 437 Pfam Protein kinase domain 136 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g01268 437 PANTHER OS01G0750732 PROTEIN 52 420 - -
Phac10g01268 437 CDD STKc_IRAK 137 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01268 Phac-Chr10 35087687 35091468 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01268 9 399 Receptor kinase-like Gene Family AT1G79620 39.447 6.32e-71 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Phac10g01268 Pkinase 2.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01268 - - gmx:100792034 739.569