Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac10g01266 | ATGGGAGGTTGCTGTTGTTCTGCCAGGAAAACTCACCTGCATGGGACACCAGTGTATTACTATTGCCCACCAACTTTAGAAGAGCGTGAGTCTTTAACATCTAATGATGGTGCCACTACTTCACTCACTACTGGATTGCTGGTAGGCTTGAACCTGGAAACTTCTTCCCCTGATACATACCAGCCCCCTCCTGCACCTCTACCATATGATACGGTCCTGGGAGGTCCAGCATCAACAAAATCTGAATCAGGCAGAGAAACAGTTAGTGCTACTAGCTTTGAGACATTAATTACATCTGAAGATCTTGAAGAATCTGACTGTAAAGCTAAAGCTATTTCAACACCTATATCTCCAAGCAAGGCAGAACTGTCAAAATCAAAAGAATTTCATGCATTAGTGACAGAAGAAGAGGACGAATGTCCAATTTGCCTTGATGAATATGATGTTGAGAATCCTAAAACTCTGACAAAATGTGAACACCACTTTCACTTGTCTTGCATTCTTGATTGGATGGAAAGAAGTGACTTCTGTCCTATATGTGATCAGGAGATGATATTTGACCACACACTGAACTAG | 576 | 0.4184 | MGGCCCSARKTHLHGTPVYYYCPPTLEERESLTSNDGATTSLTTGLLVGLNLETSSPDTYQPPPAPLPYDTVLGGPASTKSESGRETVSATSFETLITSEDLEESDCKAKAISTPISPSKAELSKSKEFHALVTEEEDECPICLDEYDVENPKTLTKCEHHFHLSCILDWMERSDFCPICDQEMIFDHTLN* | 192 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac10g01266 | 191 | Pfam | Ring finger domain | 138 | 180 | IPR001841 | - | |
Phac10g01266 | 191 | FunFam | Putative E3 ubiquitin-protein ligase RHB1A | 116 | 185 | - | - | |
Phac10g01266 | 191 | CDD | RING-H2_AIRP1-like | 136 | 184 | - | - | |
Phac10g01266 | 191 | ProSiteProfiles | Zinc finger RING-type profile. | 140 | 181 | IPR001841 | - | |
Phac10g01266 | 191 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 117 | 187 | IPR013083 | - | |
Phac10g01266 | 191 | PANTHER | ZINC FINGER, RING/FYVE/PHD-TYPE | 37 | 187 | - | - | |
Phac10g01266 | 191 | SMART | ring_2 | 140 | 180 | IPR001841 | - | |
Phac10g01266 | 191 | SUPERFAMILY | RING/U-box | 130 | 187 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac10g01266 | Phac-Chr10 | 35057758 | 35060991 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac10g01266 | 1 | 191 | C3H Transcription Factor Family | AT4G00335 | 59.162 | 5.42e-77 | 227 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac10g01266 | - | - | gmx:100804435 | 352.829 |