Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01265 ATGGGAGGTTGCTGTTGTTCTGCCAGGAAAACTCACCTGCATGGGACACCAGTGTATTACTATTGCCCACCAACTTTAGAAGAGCGTGAGTCTTTAACATCTAATGATGGTGCCACTACTTCACTCACTACTGGATTGCTGGTAGGCTTGAACCTGGAAACTTCTTCCCCTGATACATACCAGCCCCCTCCTGCACCTCTACCATATGATACGGTCCTGGGAGGTCCAGCATCAACAAAATCTGAATCAGGCAGAGAAACAGTTAGTGCTACTAGCTTTGAGACATTAATTACATCTGAAGATCTTGAAGAATCTGACTGTAAAGCTAAAGCTATTTCAACACCTATATCTCCAAGCAAGGCAGAACTGTCAAAATCAAAAGAATTTCATGCATTAGTGACAGAAGAAGAGGACGAATGTCCAATTTGCCTTGATGAATATGATGTTGAGAATCCTAAAACTCTGACAAAATGTGAACACCACTTTCACTTGTCTTGCATTCTTGATTGGATGGAAAGAAGTGACTTCTGTCCTATATGTGATCAGGAGATGATATTTGACCACACACTGAACTAG 576 0.4184 MGGCCCSARKTHLHGTPVYYYCPPTLEERESLTSNDGATTSLTTGLLVGLNLETSSPDTYQPPPAPLPYDTVLGGPASTKSESGRETVSATSFETLITSEDLEESDCKAKAISTPISPSKAELSKSKEFHALVTEEEDECPICLDEYDVENPKTLTKCEHHFHLSCILDWMERSDFCPICDQEMIFDHTLN* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01265 191 Pfam Ring finger domain 138 180 IPR001841 -
Phac10g01265 191 FunFam Putative E3 ubiquitin-protein ligase RHB1A 116 185 - -
Phac10g01265 191 CDD RING-H2_AIRP1-like 136 184 - -
Phac10g01265 191 ProSiteProfiles Zinc finger RING-type profile. 140 181 IPR001841 -
Phac10g01265 191 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 117 187 IPR013083 -
Phac10g01265 191 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 37 187 - -
Phac10g01265 191 SMART ring_2 140 180 IPR001841 -
Phac10g01265 191 SUPERFAMILY RING/U-box 130 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01265 Phac-Chr10 35057758 35060991 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01265 1 191 C3H Transcription Factor Family AT4G00335 59.162 5.42e-77 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01265 - - gmx:100804435 352.829