Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01244 ATGGCTGTGATGAGTTCTATGCCTGCAACTCCACCACAGGTCAATCCTAAGAACAAGCTTCGTGATATTGGGGTTCCTGGAATCACAGCTAGTAGGAGAGAAATTGTAAGTGAGCCTAGTCCAAGTATGGTTAATGATACAGTCTATGTTGCCGTGGCAAAAGATGTGAAAGACAGCAAATTAAATCTCATATGGGCAATACAAAATTCTGGAGGAAGGAGAATTTGCATCCTTCATGTTCACGTGCCAGCACCTATGATCCCTTTGATGGGTGCAAAATTTCCTGCAAGTGCACTGAGAGAGCAGGAAGTTCAAGATTATCATGAGAGGGAAAGGCAAAACATTCAGAAGACTATGGATGCCTATCTTCATATCTGTCAAAAAATGGGGGTGGGGGCAGGGAAACTACACATTGAAATGGATAGTGTAGAAAAAGGGATTGTAGAACTCATCCACCAGTATGGCATACAGAGGCTTGTAATGGGAGCAGCATCTGATAAGTACCATTCTAGGAGAATGATATCTCTCAAATCTAAGAAAGCTATATATGTATGTGAACAAGCTCCAGCTTCATGTCATATACAGTTTATCTGCAACGGGTACCTCATACACACAAGGGATTGCAGATTGGATAGAGGGAATGTAGAGGTTGTATCTCCTTCTGTGCAGCGAATAGCAAACTCTGAAGTTGGGAATTCACCTAACATGGGGTCGCCATCCACAGTGCAAGGGCAAAATCGTTGGAGAAAACTAAGTAATCCCGGAAAAGAGTTATTTCGTAGAGTTAGGACTATCAGTGATGGAGATGGGAGGAGCATTGGATCTGTTTCTTCTTTAGAAGGGTTCTTAACTCCTCAGAGAAAGTTCGGTAAAGAAGCAAGTTGTGACGAGGTAGGTGGGCAGTCACGGCGGAGTCCTTCAGTATTCTCAATGTGCTGCGAGAGTTGTTCGGTTGATCCATATTTTATTAACAATGGCAGTGAGAATGTAGAATTGTCATTGAATGACTTTTCTATGAATAACAAGGATCTTCATCATTCACCATCTTCAAGTGTACTGGATGGAGGAATGGATGATGCTCTCTATGCTCAACTTGAACAGGCAATTGCTGAGGTTGCGAATGCTAAGCACGATGCATATCAAGAAACTTTTAAGCGTGTGAAAGCAGAAAGAGATTCCATTGATGCTATCCGCAACGCTAAAGCCATTGAGAATTTGTATCAAGAAGAGCTAAAACTAAGAAAAGAACAAGAGGAAGAAGTGCAGAAAGCAAATGAAGAACTTGAGGATATGAAGAGGCAGATAAACAAAGTTAATGAGGAACTCCAACTCGCCTTTGATCAGAAATTATCTCTAGAGAATCGAATTGCATCAACTGAACTTATTATAAAGGAGTTGGAGCAGAAGAATATATCTGCTGCTGAGCTGTCTCAAAAGTACAAGAATGAAGTAGATGATTTGCAAATGCAGCGTGATAATGCATTGGGAGAGGCCGAGGAGTTAAGGAGAAAACAAGGGGAAGCCTCAAGCACGCACGGGCTTCAACCCTTCTCAGAATTCTCCTTTTCAGAGATTAAAGAAGCAACAAGAAACTTCAATCCATCCCTCAAGATTGGACAAGGAGGATATGGAAGTATATTTAGAGGTATCTTACGTCACACTGAGGTGGCTATAAAAATGTTGAGTCCTGATAGCACCCAAGGTCCAGTGGAGTTTCAACAAGAGGTTGAAGTATTGAGCAAGTTAAGGCACCCCAACCTTGTGACACTTATAGGGTCCTGCCCAGAATCTTGGACTCTTGTCTATGAGTATTTACCCAATGGAAGCCTTGAAGATCGTCTAAACTGCAAGGATAATACACCTCCATTATCATGGCAAACTAGAATTCGCGTTGCTGCAGAACTCTGCTCGGCTCTTATCTTTCTTCACTCAAGTAAACCTCACAGCATAGCACATGGTGATTTAAAACCAGGCAACATTCTTCTTGATGCAAACTTTGTAAGCAAGCTCGGTGACTTTGGAATCTGTCGTATATTATCTTGTCAAGAGGGTTCAAGTAGCAGCACTACACAGTTTTGGAGAACTGTTCCAAAGGGAACTTTTGTGTATGTGGATCCTGAATTCCTTACTTCTGGTGAACTCACACCAAAGTCAGATGTTTATTCATTTGGAATCATTCTATTGAGATTGATCACTGGGAAACCTGCTTTGGGAATAGCAAAGGAAGTGCAATATGCATTAGATAGTAGAAAGTTGAAATCCATCTTGGATCCATTGGCTGGAGACTGGCCATTTATGCTAGCTGAAGAGTTGGTTCGCTTGGCTTTGAGGTGTTGTGAGATGAGTAGAAGGAACAGACCAGATTTTTATCCAGATGTTTGGAGAATACTGGAACCAATGAGGGCTTCTTGTGGAGGCAGCAACACCTTTCAACAGGGTTCTCAAGGAAAATGCCAACCTCCTCCATATTTCATTTGTCCAATCTCTCTGGAAGTCATGCAAGATCCACACGTGGCTGCAGATGGTTTTACTTATGAAGCTGAGGTTATACGTGAATGGCTGAAAAATGGTCGACACGTTTCACCAAGGACAAACTCTAAGTTCGCACATCACCACCTCATTCCCAACCACTCTCTTCGCCATGCAATTCAGGACTGGCTTCAAACTCACTGA 2673 0.4224 MAVMSSMPATPPQVNPKNKLRDIGVPGITASRREIVSEPSPSMVNDTVYVAVAKDVKDSKLNLIWAIQNSGGRRICILHVHVPAPMIPLMGAKFPASALREQEVQDYHERERQNIQKTMDAYLHICQKMGVGAGKLHIEMDSVEKGIVELIHQYGIQRLVMGAASDKYHSRRMISLKSKKAIYVCEQAPASCHIQFICNGYLIHTRDCRLDRGNVEVVSPSVQRIANSEVGNSPNMGSPSTVQGQNRWRKLSNPGKELFRRVRTISDGDGRSIGSVSSLEGFLTPQRKFGKEASCDEVGGQSRRSPSVFSMCCESCSVDPYFINNGSENVELSLNDFSMNNKDLHHSPSSSVLDGGMDDALYAQLEQAIAEVANAKHDAYQETFKRVKAERDSIDAIRNAKAIENLYQEELKLRKEQEEEVQKANEELEDMKRQINKVNEELQLAFDQKLSLENRIASTELIIKELEQKNISAAELSQKYKNEVDDLQMQRDNALGEAEELRRKQGEASSTHGLQPFSEFSFSEIKEATRNFNPSLKIGQGGYGSIFRGILRHTEVAIKMLSPDSTQGPVEFQQEVEVLSKLRHPNLVTLIGSCPESWTLVYEYLPNGSLEDRLNCKDNTPPLSWQTRIRVAAELCSALIFLHSSKPHSIAHGDLKPGNILLDANFVSKLGDFGICRILSCQEGSSSSTTQFWRTVPKGTFVYVDPEFLTSGELTPKSDVYSFGIILLRLITGKPALGIAKEVQYALDSRKLKSILDPLAGDWPFMLAEELVRLALRCCEMSRRNRPDFYPDVWRILEPMRASCGGSNTFQQGSQGKCQPPPYFICPISLEVMQDPHVAADGFTYEAEVIREWLKNGRHVSPRTNSKFAHHHLIPNHSLRHAIQDWLQTH* 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01244 890 FunFam receptor-like protein kinase FERONIA 496 604 - -
Phac10g01244 890 MobiDBLite consensus disorder prediction 227 247 - -
Phac10g01244 890 Gene3D Phosphorylase Kinase; domain 1 502 604 - -
Phac10g01244 890 SMART Ubox_2 823 886 IPR003613 GO:0004842|GO:0016567
Phac10g01244 890 SUPERFAMILY RING/U-box 810 890 - -
Phac10g01244 890 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 818 890 IPR013083 -
Phac10g01244 890 ProSiteProfiles U-box domain profile. 819 890 IPR003613 GO:0004842|GO:0016567
Phac10g01244 890 SMART serkin_6 532 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g01244 890 ProSiteProfiles Protein kinase domain profile. 532 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g01244 890 SUPERFAMILY Protein kinase-like (PK-like) 510 790 IPR011009 -
Phac10g01244 890 MobiDBLite consensus disorder prediction 1 23 - -
Phac10g01244 890 MobiDBLite consensus disorder prediction 495 514 - -
Phac10g01244 890 Gene3D Transferase(Phosphotransferase) domain 1 605 812 - -
Phac10g01244 890 Pfam U-box domain 821 890 IPR003613 GO:0004842|GO:0016567
Phac10g01244 890 ProSitePatterns Protein kinases ATP-binding region signature. 538 559 IPR017441 GO:0005524
Phac10g01244 890 Coils Coil 399 504 - -
Phac10g01244 890 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 59 171 - -
Phac10g01244 890 CDD STK_N 47 200 - -
Phac10g01244 890 PANTHER OS02G0152300 PROTEIN 48 885 - -
Phac10g01244 890 ProSitePatterns Serine/Threonine protein kinases active-site signature. 650 662 IPR008271 GO:0004672|GO:0006468
Phac10g01244 890 Gene3D HUPs 42 165 IPR014729 -
Phac10g01244 890 Coils Coil 362 390 - -
Phac10g01244 890 CDD RING-Ubox_WDSUB1-like 821 876 - -
Phac10g01244 890 Pfam Protein kinase domain 536 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01244 Phac-Chr10 34821600 34827597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01244 356 890 U-box Gene Family AT2G45910 59.252 0.0 653
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Phac10g01244 Pkinase 2.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01244 - - var:108321203 1481.46