Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01183 ATGGGAAGGAAACCCTGTTGTGACAAGATGGGTTTGAAGAAGGGTCCTTGGACTGCTGAAGAGGATGAGATTCTTGTCAATTATATCAACGTGAATGGTGGCCATGGAAGTTGGCGTTCTCTCCCCAAGTTAGCAGGTCTTCTTCGTTGTGGTAAGAGTTGTCGGCTAAGATGGACCAACTACCTCAGACCAGATATTAAACGTGGTTCCTTTACTCTTGAGGAAGAAAAACTAATCATACAGCTTCATGGTATCCTTGGAAATAGGTGGGCTGCTATAGCCTCTCAGCTACCAGGAAGAACAGACAATGAAATCAAGAACTTATGGAACACCCATTTGAAGAAACGTCTCATTTGCATGGGCCTTGACCCTCAAACCCACCAGCCACTGTCCTCTTCATGCAACCCTGATGGCAAGGCCCATGCAGCATCCACCTCAACCCGCCACATGGCCCAGTGGGAGAGTGCAAGGCTTGAAGCAGAGGCCAGGCTCTCAAGGGAGCCCTATTTGTTCAACAACTCCAACAAAACTGACTCTGACTACTTCCTCCGAATGTGGAACTCTGAAGTTGGACAATCTTTTCGTGATGTGCACAAATCAGACAACAAAGGTGGCTGTCAAAGTCCTATTTCTCTAGGGTCATTGTCTGCTACCACCACCACAGATTTGGCTTCCAACCCTGCAAGCATTGTGAAAGAGGATTTGGTGTGGGGTGGTAGCAAGAAAATTGCCTCTGATTCATCAAGCTCTAGTGAACTAGAAGAAGACTCATGTGACACTTCATTGCAGCTCTTGTTAGACTTCCCTATAAACAATGACATGAGCTTCTTAGAATGA 837 0.4636 MGRKPCCDKMGLKKGPWTAEEDEILVNYINVNGGHGSWRSLPKLAGLLRCGKSCRLRWTNYLRPDIKRGSFTLEEEKLIIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLICMGLDPQTHQPLSSSCNPDGKAHAASTSTRHMAQWESARLEAEARLSREPYLFNNSNKTDSDYFLRMWNSEVGQSFRDVHKSDNKGGCQSPISLGSLSATTTTDLASNPASIVKEDLVWGGSKKIASDSSSSSELEEDSCDTSLQLLLDFPINNDMSFLE* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01183 278 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Phac10g01183 278 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 241 - -
Phac10g01183 278 Gene3D - 11 68 - -
Phac10g01183 278 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Phac10g01183 278 Gene3D - 70 117 - -
Phac10g01183 278 FunFam MYB transcription factor 70 117 - -
Phac10g01183 278 FunFam Myb transcription factor 11 68 - -
Phac10g01183 278 CDD SANT 16 62 IPR001005 -
Phac10g01183 278 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Phac10g01183 278 SUPERFAMILY Homeodomain-like 10 109 IPR009057 -
Phac10g01183 278 SMART sant 67 115 IPR001005 -
Phac10g01183 278 SMART sant 13 64 IPR001005 -
Phac10g01183 278 CDD SANT 70 113 IPR001005 -
Phac10g01183 278 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Phac10g01183 278 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Phac10g01183 278 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01183 Phac-Chr10 33386939 33389218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01183 1 278 MYB Transcription Factor Family AT3G61250 62.069 3.62e-120 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac10g01183 Myb_DNA-binding 2.8e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01183 K09422 - gmx:100788528 460.299