Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac10g01151 | ATGGCTTTCCCTCCTTACCAACGATCCCACTTGCGTAGCAACACTTACCATGCCCTTGTTCACCTCCTCTCTCACCTTGCTAAGTACAACTCTTCACATGAAACTCCAACTCAACCCTTCAACATTCCTGATAATGGCAGTGGTAGAATGGATGGAGTAAACCAAGAAAAGGAGCCTAAGGGCTCTGAAGTTGTTGATTCCGATTTTTTGGATCCTATAAGCCAGAAGGATATACTGGAGGTTCAGGAGCTTATTAAGGGGGTTGGAGACAAGGATACGGATTTTACTTCCAACAATATGGTCCTAGATGATATAGAACATATGATGGCAATAGAGGACACGTCTAACCAAGTAATTGGTTTTGATAAGGAGCAGAAGCTAATAAATGAGTTTGAACTGGTTATGAAAGGAACTGAAGATCTTATTTGCGATAGTGATTTAATCCCCCTGAATGCTGGATTTGATGAGAAACATAATGATGGCTGTGAAGTTGGGTTAATGGATTCTCAAGTAGACATGGAAGAGGGAGAAATTTCTGGAGACTTGGGAAAGGATGACAGTTCATTTGATGTGTCTTCTGCAGATGCTTTGCGGCAGATGAAGGTAGATGAAGTTCAGAAGCCTGTAAATGTAACTAGAAATATGATATATCCTTCTATGATTAAGAATCAAGAAAAGGAAAAAGGTTGTGAGTCTACTTCGTCTATGTTAAATTCACTTCAAGATGGCAATAATAGTAGACAAGTGGAGCCTAGAACTGGTGGCAACAAAGGAATTGCATGCAGAGTTGAAGTAGCAATTTCTGAAGAAACTTTTGAATGTAAGAAGGAAGATAAAACGAAGTTGGTGAATGCCAGTAAAAGGAACAAGCGTGGTGGAAAGAAAGAAAAAAAAAAGATGGCATTTAGAATGAAGAGAGCAGCAAAAAACAGAGAACTAGGTATTAAAAGTTTGCAGTTGCAGAAGTATATGCAGAAACCAAAAGTTGTGTCACATTGTCGCCATTATCTTGTGGGAAGGTGCCATGAGGGTGACAAGTGTCAGTTCTCACACGATGTAGTGCCTCTAACAAAATCCAAGCCATGTAGTTACTTTGCTTTCCACTCTTGCATGAAAGGCGATGATTGCCCATTTGATCATGAGCTCTCAAAATATCCTTGTAACAATATTGTATCCCAAGGCTCTTGTAGAAGAGGTGAAACTTGCCTTTTTTCACACCAGGTAGCATCCAAAGAAGATATCCCTACTCCTTCAAACATATGCAGACCAGTGTTGTCTACTGTTCAGTCAGGAAATGCAAATTCCAGTACACCTCTTAGCAATAATCATGTCTCTTGTTCTGTCCAGCAAAACCGCTTAACTCGTTCTTCAGGAATTCATTCTCGCATCAATGTCGAACATAAGGTGACAAACACTGCACAAAAACAGACACCACCTAAAGGAATTAGTTTCATCAATCTTGCAAAATTAACACCCAGCTCTTCTGCACTTAAACAAGGCACAGTAACAATCAAGGAAAGTCCTTTACAAGCAGGGACCCACAAAGATCAAAGTGCATTTGAAAAAACTCAAACCAAGGTGGAGATTGCTGAGAAATTGCCATCTGTGACACCAAAAGGAGTAAACTTTCTTTCTTTTGGCAACGGCTCTGTCTGTGGCTTTAAAAGTCATATTCGTCCCAATGTGAGTACAGAAAATGGTTTCAAGTTGCCTCAGTTACTCAATTTTGGTTTGCCTGAGAAGGCTAATTCTTCTCTAAACAAGAACAACTACAACCAAGCTAGTGACAGGACAAAACAAAGTGTATCATTGACTGATATATTCTTAAATGAGATTTTAGGAAAAAATCAATCTGTGGCAGAAGGAATGAAATCAAAGTTTCCAGATAAAACCTCAGCTACACCAAGTCCTTTTGTTTCAATCCAGTCTTCTGAACACGTAAAATCTGGTTATCATAAGCATGCATCAAACTCAGGTCAAAAGGCATTCTTGTCAACTTTAGCATTTGCAGCAGAGCATGAATCTGACATTAAGATGAAATACCCTTCCGGTGATTCGTCTGCATGA | 2067 | 0.3953 | MAFPPYQRSHLRSNTYHALVHLLSHLAKYNSSHETPTQPFNIPDNGSGRMDGVNQEKEPKGSEVVDSDFLDPISQKDILEVQELIKGVGDKDTDFTSNNMVLDDIEHMMAIEDTSNQVIGFDKEQKLINEFELVMKGTEDLICDSDLIPLNAGFDEKHNDGCEVGLMDSQVDMEEGEISGDLGKDDSSFDVSSADALRQMKVDEVQKPVNVTRNMIYPSMIKNQEKEKGCESTSSMLNSLQDGNNSRQVEPRTGGNKGIACRVEVAISEETFECKKEDKTKLVNASKRNKRGGKKEKKKMAFRMKRAAKNRELGIKSLQLQKYMQKPKVVSHCRHYLVGRCHEGDKCQFSHDVVPLTKSKPCSYFAFHSCMKGDDCPFDHELSKYPCNNIVSQGSCRRGETCLFSHQVASKEDIPTPSNICRPVLSTVQSGNANSSTPLSNNHVSCSVQQNRLTRSSGIHSRINVEHKVTNTAQKQTPPKGISFINLAKLTPSSSALKQGTVTIKESPLQAGTHKDQSAFEKTQTKVEIAEKLPSVTPKGVNFLSFGNGSVCGFKSHIRPNVSTENGFKLPQLLNFGLPEKANSSLNKNNYNQASDRTKQSVSLTDIFLNEILGKNQSVAEGMKSKFPDKTSATPSPFVSIQSSEHVKSGYHKHASNSGQKAFLSTLAFAAEHESDIKMKYPSGDSSA* | 689 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac10g01151 | 688 | Pfam | CCCH-type zinc finger | 332 | 352 | IPR041367 | - | |
Phac10g01151 | 688 | ProSiteProfiles | Zinc finger C3H1-type profile. | 356 | 383 | IPR000571 | GO:0046872 | |
Phac10g01151 | 688 | ProSiteProfiles | Zinc finger C3H1-type profile. | 327 | 354 | IPR000571 | GO:0046872 | |
Phac10g01151 | 688 | PANTHER | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI | 160 | 684 | IPR045124 | GO:0003723|GO:0045892 | |
Phac10g01151 | 688 | Gene3D | - | 318 | 384 | - | - | |
Phac10g01151 | 688 | ProSiteProfiles | Zinc finger C3H1-type profile. | 386 | 409 | IPR000571 | GO:0046872 | |
Phac10g01151 | 688 | MobiDBLite | consensus disorder prediction | 30 | 44 | - | - | |
Phac10g01151 | 688 | SMART | c3hfinal6 | 356 | 382 | IPR000571 | GO:0046872 | |
Phac10g01151 | 688 | SMART | c3hfinal6 | 384 | 408 | IPR000571 | GO:0046872 | |
Phac10g01151 | 688 | SMART | c3hfinal6 | 326 | 353 | IPR000571 | GO:0046872 | |
Phac10g01151 | 688 | MobiDBLite | consensus disorder prediction | 51 | 65 | - | - | |
Phac10g01151 | 688 | MobiDBLite | consensus disorder prediction | 234 | 254 | - | - | |
Phac10g01151 | 688 | MobiDBLite | consensus disorder prediction | 234 | 252 | - | - | |
Phac10g01151 | 688 | MobiDBLite | consensus disorder prediction | 30 | 65 | - | - | |
Phac10g01151 | 688 | SUPERFAMILY | CCCH zinc finger | 328 | 352 | IPR036855 | GO:0046872 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac10g01151 | Phac-Chr10 | 32932900 | 32938124 | Dispersed/Tandem |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C3H | Phac10g01151 | zf-CCCH_4 | 1.4e-06 | CL0537 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac10g01151 | - | - | vun:114165961 | 1037.71 |