Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01143 ATGCCTCGTGGAACGCTTGAAGTTATTTTGATCAGCGCCAAAGGCATCGATGACAATGATTTTCTCTCCAGCATAGATCCTTATGTGATTCTCACATACAGGACACAGGAGCACAAGAGCACTGTGCAAAAAGATTCTGGATCCAAACCTCAATGGAATGAGAACTTTCTTTTCACTGTCTCTGACAGTACTTCTGAACTTAACCTAAAGATCATGGATAAAGACAACTTTACTCAAGATGATTTTCTTGGCGAGGCAACCATTGATTTAGGTCCACTGTTTGAAGCTGGTAGCCTTCCAGAAACTGTTCACAAGGTTGTGAAGGACGAAGAATATTGTGGAGAGATTAAGGTGGCTCTCACTTTCACTGCTGAGAGAAACGAGGAGCAGGAATATAGTGTAGAGGATGAGAACTATGGTGGATGGAAAGAATCAAATGAGGAATTCTAG 450 0.4178 MPRGTLEVILISAKGIDDNDFLSSIDPYVILTYRTQEHKSTVQKDSGSKPQWNENFLFTVSDSTSELNLKIMDKDNFTQDDFLGEATIDLGPLFEAGSLPETVHKVVKDEEYCGEIKVALTFTAERNEEQEYSVEDENYGGWKESNEEF* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01143 149 PANTHER C2 DOMAIN-CONTAINING 1 138 - -
Phac10g01143 149 SMART C2_3c 5 102 IPR000008 -
Phac10g01143 149 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 124 IPR035892 -
Phac10g01143 149 Pfam C2 domain 4 96 IPR000008 -
Phac10g01143 149 MobiDBLite consensus disorder prediction 129 149 - -
Phac10g01143 149 Gene3D C2 domain 2 124 IPR035892 -
Phac10g01143 149 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01143 Phac-Chr10 32866546 32869002 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01143 4 134 C2H2 Transcription Factor Family AT4G21160 32.824 1.52e-14 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01143 - - gmx:100500006 259.225