Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01139 ATGAATCTCGTTTGTGTTGGAGCAAGTACAATCTCTACCTCAAATGTTTCACCTTATCAATCCACGTCATTTAAAGACAATATTCAAGATACATTATGCAATAATGTTGTTGGTGATCTTGTCCCTGAGTTTACCTCTACCTCTCAACTTTTTTCCCCTCTTGTTTTTTCTCCCATTGTTCTTCCTAACACTCATGTCTCTGCCATATCACAAAACATCACCCTATCCGAAAACGTTCGATCTGGTTGGGTTCAAACGTCTAATTTCTCAAATCACCCAACACCTTATGAACATGTTCACCCTAATTTCTCAAATCACCCAACACCTTCCGAACATGTTCACTCTGTTTGGGTTCAAAAGTCTATATGCTCAAATCATCAAACACCTCCCTTATCAAAGTCACATTGCAAACGATACGAGCGATGGACAGAAGATGAACATAGATTATTTCTTATTGGAATTGACAAGTGTGGTTGGGGAGATTGGAAAGACATCTCAAAATTGTATATTCCATCAAAATCTCCAATTCAAATAGCTAGTCATGCTCAAAAGTATAAGCTTCATCAAAAGGATCAAATGAAAAATAAGAAGAGAAAAAGTATCCATGACATAATATTAGAGACAGTTGTTGGTCCTAACTTTGTTGATCAACAACAAGGACTTCCTCCAACTCCAAATGTTACCATACAATCACAAAAAATATAA 705 0.3631 MNLVCVGASTISTSNVSPYQSTSFKDNIQDTLCNNVVGDLVPEFTSTSQLFSPLVFSPIVLPNTHVSAISQNITLSENVRSGWVQTSNFSNHPTPYEHVHPNFSNHPTPSEHVHSVWVQKSICSNHQTPPLSKSHCKRYERWTEDEHRLFLIGIDKCGWGDWKDISKLYIPSKSPIQIASHAQKYKLHQKDQMKNKKRKSIHDIILETVVGPNFVDQQQGLPPTPNVTIQSQKI* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01139 234 ProSiteProfiles SANT domain profile. 140 190 IPR017884 -
Phac10g01139 234 CDD SANT 141 186 IPR001005 -
Phac10g01139 234 Gene3D - 141 190 - -
Phac10g01139 234 Pfam Myb-like DNA-binding domain 141 186 IPR001005 -
Phac10g01139 234 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 141 190 IPR017930 -
Phac10g01139 234 PANTHER TRANSCRIPTION FACTOR KUA1 97 217 - -
Phac10g01139 234 SUPERFAMILY Homeodomain-like 136 191 IPR009057 -
Phac10g01139 234 SMART sant 138 188 IPR001005 -
Phac10g01139 234 NCBIfam myb-like DNA-binding domain, SHAQKYF class 137 189 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01139 Phac-Chr10 32788027 32789398 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phac10g01139 Myb_DNA-binding 7.3e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01139 - - pvu:PHAVU_008G085600g 197.978