Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01109 ATGGATGGTGGGGAAGAGAGGGGAGAGATGTGGAAGAAGGACGTTCGTTTTTTCATTCTGTTGAGAAACGACAACATTGTTTTTAAGGAAGTTTTAACATTTTGGTTTACATTATGTGATCCACTATTTGAGGTTGATTGTTTTCTCAGCCACATTTCTTGCATTGATATGTGGCTGAAAAAACAATCAACTTGTCCAATGTATCGTTTATCACTGCAAAATTCTTCTGAGACAAAACATGCGGCGAGTCATGTAAGATTTACCATCAGACATTCTCTAGCTGAGTCTAATACTTCGAAAAGGAACATAGACAGTAAGAGGCAAGTTAAACCAAATTCTATGATATCTCTGCAATCAATTTTGGAAGAGCTAGAAGGTAGATAG 384 0.3698 MDGGEERGEMWKKDVRFFILLRNDNIVFKEVLTFWFTLCDPLFEVDCFLSHISCIDMWLKKQSTCPMYRLSLQNSSETKHAASHVRFTIRHSLAESNTSKRNIDSKRQVKPNSMISLQSILEELEGR* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01109 127 PANTHER OS11G0150450 PROTEIN 51 102 - -
Phac10g01109 127 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 28 110 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01109 Phac-Chr10 32413154 32414024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01109 51 100 C3H Transcription Factor Family AT1G53820 34.545 6.34e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01109 - - pvu:PHAVU_L008800g 101.293