Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01092 ATGGTGGAAGCTAGTAAAGATGCAGTAGCAGTTGATGCCTGTTCAAGAGAACACTGGTTGTTGCATGCACAGGAACTTGTTCCTGTGGCTCTTGCTAAGGCAAGAGAGGTTAAGGTGTTCCCTGGTAGGTGGAAGATGATCATTTCAAAATTGGAGCAGATTCCTTCCTGTTTATCGGATTTGTCTAGCCACCCTTGTTTCTCCAAGAATGTTCTCTGCAAGGAGCAATTGCAGGCTGTGTCAAAGACACTTGAAGAAGCCACGGAATTAGCTGAGTTGTGTGTGAAGGAGAAGTATGAGGGTAAGCTTCGGATGCAGAGTGATCTTGATGCATTAACAGGGAAACTGGATTTGAATTTGAAGGATTGTGGTCTCTTGATCAAGACCGGTGTGCTTGGTGAAGCTACTTTGCCATTAACCGTGTTAGGTTTTATGGCAGAATCAGATATTGCAAGACACAACAATATAAGAGAACTACTAGCGCGGCTTCAGATTGGTCACATGGAAGCAAAGCACAAAGCCTTAGACAGACTGTATGATGTTATGAAAGAGGATGAGAAGAATGTTTTGGCTGTTCTTGGCAGGAGGAATGTTGCTGCTTTGGTTCAATTGCTCACAGAAACCTCTTCAAGGATAAGAGAGAAGACAGTTACTGTTATATGCTCTCTTGTGGAATCGGGGAGCTGTGAAAAGTGGCTAGTTTCTGAAGGAGTTCTGCCACCTCTTATTAGACTTGTTGAATCTGGTAGTGCTGCCAGTAAAGAGAAGGCTATAGTATCTCTTCAGAGATTGTCAATGTCAGCAGAAACAACTCGTGCAATTGTGGGACATGGTGGTGTTCGGCCATTGATTGAGCTTTGTCAAAGTGGCGATTCTGTGTCACAGGCTGCTGCTGCCTGTACTTTGACAAATATATCAGCTGTTCCTGAGGTGAGACAGGCTTTGGCTGAAGAAGGTATTGTAAGCGTTATGATCAATCTTCTTAATTGTGGAATTTTATTAGGTTCGAAAGAGTATGCAGCTGAGTGCTTGCAGAATCTGACTTCAAGCAATGAGCATTTGAGAAAGTCTGTTATATCAGAAGGTGGTGTTAGAAGTCTTCTGACCTATCTTGATGGTCCACTTCCCCAAGAATCTGCAGTTGGAGCATTGAGGAATCTGGTTGGATCAGTTTCTGAGGAAACTTTGGTTTCTCTTGGTTTGCTTCCCCGTTTGGTTCATGTTCTCAAGTCTGGATCTTTGGGTGCTCAACAAGCTGCCACTTGTGTGATTTGCCGAGTTTGCAGCTCAATGGAGATGAAGAAAATGGTGGGTGAAGCTGGCTGCATCCCTCTTCTTATAAAGATGCTTGAAGCTAAAGCAAATAGTGCTAGAGAGGTTGCTGCTCAAGCAATTTCAAGCCTAATGGTTCTGTCCCAGAATCGGAGAGAGGTTAAGAAAGATGATAAAAGTGTGCCAAATCTTGTCCAGTTGCTTGATCCAAGCCCTCAGAACAGTGCCAAAAAGTATGCAGTTTCATGCCTTGGATCACTTTCCCCATGCAAGAAGTGTAAGAAACTAATGATTTCGTATGGAGCAATCGGGTATCTGAAGAAGCTTACAGAGATGGAGATTCCAGGAGCTAAAAAGCTACTTGAGAGGTTGGAAAGAGGGAAATTGAGAAGCTTGTTCAGCAGAAAGTAG 1683 0.4355 MVEASKDAVAVDACSREHWLLHAQELVPVALAKAREVKVFPGRWKMIISKLEQIPSCLSDLSSHPCFSKNVLCKEQLQAVSKTLEEATELAELCVKEKYEGKLRMQSDLDALTGKLDLNLKDCGLLIKTGVLGEATLPLTVLGFMAESDIARHNNIRELLARLQIGHMEAKHKALDRLYDVMKEDEKNVLAVLGRRNVAALVQLLTETSSRIREKTVTVICSLVESGSCEKWLVSEGVLPPLIRLVESGSAASKEKAIVSLQRLSMSAETTRAIVGHGGVRPLIELCQSGDSVSQAAAACTLTNISAVPEVRQALAEEGIVSVMINLLNCGILLGSKEYAAECLQNLTSSNEHLRKSVISEGGVRSLLTYLDGPLPQESAVGALRNLVGSVSEETLVSLGLLPRLVHVLKSGSLGAQQAATCVICRVCSSMEMKKMVGEAGCIPLLIKMLEAKANSAREVAAQAISSLMVLSQNRREVKKDDKSVPNLVQLLDPSPQNSAKKYAVSCLGSLSPCKKCKKLMISYGAIGYLKKLTEMEIPGAKKLLERLERGKLRSLFSRK* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01092 560 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 237 279 IPR000225 GO:0005515
Phac10g01092 560 SUPERFAMILY ARM repeat 154 539 IPR016024 -
Phac10g01092 560 Pfam Armadillo/beta-catenin-like repeat 269 307 IPR000225 GO:0005515
Phac10g01092 560 Pfam Armadillo/beta-catenin-like repeat 432 468 IPR000225 GO:0005515
Phac10g01092 560 SMART arm_5 351 389 IPR000225 GO:0005515
Phac10g01092 560 SMART arm_5 430 470 IPR000225 GO:0005515
Phac10g01092 560 SMART arm_5 267 307 IPR000225 GO:0005515
Phac10g01092 560 SMART arm_5 185 225 IPR000225 GO:0005515
Phac10g01092 560 SMART arm_5 308 349 IPR000225 GO:0005515
Phac10g01092 560 SMART arm_5 390 429 IPR000225 GO:0005515
Phac10g01092 560 SMART arm_5 471 513 IPR000225 GO:0005515
Phac10g01092 560 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 16 558 - -
Phac10g01092 560 Coils Coil 557 560 - -
Phac10g01092 560 Gene3D - 153 550 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01092 Phac-Chr10 32295198 32298083 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01092 206 479 U-box Gene Family AT3G54790 26.882 7.16e-17 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01092 - - var:108346326 994.956