Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01057 ATGAGTTTTGGGGGTTTTCTTGAAAACAAATCAGGTAGTGGCAGTGCCAGAAACGACGTTTCGGATATTCCTTACAACGACGTTACCACCACCAACCATACCAACAACGACGATAGAATGCCCTTTGGTGCAATCTCTCAGCCCCGCCTCGTGACCACCACTCCCACCTTGGCCAAATCCATGTTCAACTCCCCAGGACTATCTCTAGCACTTCAAACTAATATAGATGGACAGGAAGATGTGAATAGAATGGTGGAGAATAGTTTCGAACCAAATGGTTTGCGAAGAAGCAGAGAAGAAGAACATGAAAGCAGATCTGGCAGCGACAACATCGACGGCGCTTCCGGCGATGAACAAGACGCCGCCGACAACCCTCCGAGGAAAAAACGCTATCACCGACACACACCTCAGCAGATACAAGAACTTGAAGCATTGTTCAAGGAGTGTCCTCATCCAGACGAGAAGCAAAGACTCGAACTTAGCAAGAGGCTGTCCTTGGAAACTCGACAGGTGAAGTTTTGGTTCCAAAACCGTAGAACCCAAATGAAGACCCAGTTGGAGCGGCACGAGAACACTTTGCTGAGGCAAGAGAACGACAAGCTGAGAGCGGAGAACATGTCTATCAGGGATGCAATGAGGAACCCCATGTGCTCCAATTGCGGTGGCCCTGCCATCATCGGCGAGATTTCGCTGGAGGAGCAGCACCTTCGGATTGAGAATGCCCGGTTGAAGGACGAGCTCGATCGCGTGTGTGCACTCACGGGCAAGTTTCTGGGTCGCCCCGTTTCTTCGTTACCGAATTCAAGTCTGGAGCTTGGCGTTGGGGGTAACGGGTTTGGTGGAATCAGCATGAGCACTACAATGCCTTTGGGACAAGATTTTGGAATGGGAATGTCTATGACTGTGTCTAACAACCCTTTGGCTATGGTGTCTCCCTCGAGTACTAGACCAACTTCTGTTGTGGGTGGGTTTGATAGGTCCATCGAGAGGTCCATGTTTCTTGAGCTCGCTTTGGCGGCCATGGATGAGTTGGTGAAGATGGCTCAAGCTGGGGAGCCTCTTTGGGTAAGGAATGTTGAAGGTGGGAGGGAAATTATGAACCATGAGGAGTACGTGAGGACTTTCACTCCTTGTATTGGTTTGAGACCCAATGGGTTTGTGTCTGACGCCTCTAGGGAAAATGGGATGGTCATCATTAACAGTTTGGCTCTTGTTGAGACTCTCATGGACGCGAATCGATGGGCAGAGATGTTTCCTTGTATCATTGCGAGAACCTCCACTGCTGAAGTGATATCTAATGGAATAAATGGAACAAGAAATGGAGCACTTCAATTAATGCATGCTGAACTTCAAGTTCTTTCGCCTTTGGTTCCTGTTCGTGAGGTCAATTTCCTAAGGTTTTGCAAGCAGCACGCAGAAGGGGTTTGGGCAGTGGTGGATGTGTCTATAGATAGCATCAGAGAAAGTTCAGGAGCACCACCCAGTTTTGTCAACTGTAGGAGGCTTCCTTCTGGTTGTGTTGTGCAAGACATGCCCAATGGTTACTCCAAGGTGACATGGGTGGAGCATGCAGAATACGATGAGAGCCAAGTTCATCAGGTTTATAGACCATTGTTAAGCTCAGGAATGGGGTTCGGTGCTCAACGTTGGGTGGCTACCCTTCAACGCCAATGCGAGTGTCTTGCGATCTTAATGTCCTCAGCAGCACCCTCTAGAGACCATTCAGCAATAACGGCGGGGGGAAGGCGGAGCATGGTGAAGCTGGCGCAGCGAATGACCAACAACTTCTGCGCCGGTGTGTGTGCCTCCACGGTGCACAAGTGGAACAAGCTCAACCCTGGGAACGTGGATGAGGACGTGAGGGTGATGACGCGGAAGAGCGTGGATGATCCCGGCGAGCCGCCGGGGATTGTGCTGAGTGCCGCCACCTCCGTGTGGCTCCCTGTGTCGCCCCAGAGGCTCTTCGACTTCCTCCGCGACGAGCGCCTGCGAAGCGAGTGGGACATACTCTCCAACGGTGGGCCCATGCAAGAGATGGCCCATATTGCCAAGGGCCAAGACCACGGCAACTGCGTCTCTCTCCTGCGAGCTAGTGCCATAAACTCCAACCAGAGTAGCATGCTGATACTACAGGAGACATGCATAGACGAGGCGGGGTCACTTGTGGTGTACGCGCCGGTGGATATCCCGGCCATGCACGTGGTAATGAACGGTGGTGATTCGGCTTACGTGGCATTGCTGCCTTCAGGGTTTGCTATTGTTCCAGATGGGCCCGGGTCTCGTGGGTCACAGAATGGCACTACTACCACAGCAAATGGTGGTGATAATGGTGGGGCGCGTGTGAGTGGGTCCCTCTTAACGGTGGCGTTTCAGATCCTTGTGAATAGTCTTCCTACAGCCAAGCTCACAGTAGAGTCCGTGGAAACCGTGAACAACCTCATATCATGCACCGTTCAAAAGATCAAAGCTGCCCTGCACTGCGAAAGTTAA 2490 0.5173 MSFGGFLENKSGSGSARNDVSDIPYNDVTTTNHTNNDDRMPFGAISQPRLVTTTPTLAKSMFNSPGLSLALQTNIDGQEDVNRMVENSFEPNGLRRSREEEHESRSGSDNIDGASGDEQDAADNPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLSLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENMSIRDAMRNPMCSNCGGPAIIGEISLEEQHLRIENARLKDELDRVCALTGKFLGRPVSSLPNSSLELGVGGNGFGGISMSTTMPLGQDFGMGMSMTVSNNPLAMVSPSSTRPTSVVGGFDRSIERSMFLELALAAMDELVKMAQAGEPLWVRNVEGGREIMNHEEYVRTFTPCIGLRPNGFVSDASRENGMVIINSLALVETLMDANRWAEMFPCIIARTSTAEVISNGINGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDSIRESSGAPPSFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQVYRPLLSSGMGFGAQRWVATLQRQCECLAILMSSAAPSRDHSAITAGGRRSMVKLAQRMTNNFCAGVCASTVHKWNKLNPGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAINSNQSSMLILQETCIDEAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPGSRGSQNGTTTTANGGDNGGARVSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALHCES* 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01057 829 ProSiteProfiles START domain profile. 326 563 IPR002913 GO:0008289
Phac10g01057 829 Pfam Homeodomain 128 183 IPR001356 GO:0003677
Phac10g01057 829 Pfam START domain 335 560 IPR002913 GO:0008289
Phac10g01057 829 MobiDBLite consensus disorder prediction 757 776 - -
Phac10g01057 829 Gene3D - 403 557 IPR023393 -
Phac10g01057 829 ProSiteProfiles 'Homeobox' domain profile. 125 185 IPR001356 GO:0003677
Phac10g01057 829 SMART START_1 335 560 IPR002913 GO:0008289
Phac10g01057 829 CDD homeodomain 127 185 IPR001356 GO:0003677
Phac10g01057 829 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 124 826 IPR042160 -
Phac10g01057 829 MobiDBLite consensus disorder prediction 88 135 - -
Phac10g01057 829 Gene3D - 114 201 - -
Phac10g01057 829 SUPERFAMILY Homeodomain-like 114 185 IPR009057 -
Phac10g01057 829 ProSitePatterns 'Homeobox' domain signature. 160 183 IPR017970 GO:0000981|GO:0006355
Phac10g01057 829 Coils Coil 179 211 - -
Phac10g01057 829 FunFam Homeobox-leucine zipper protein HDG1 115 201 - -
Phac10g01057 829 SUPERFAMILY Bet v1-like 587 822 - -
Phac10g01057 829 SMART HOX_1 126 189 IPR001356 GO:0003677
Phac10g01057 829 CDD START_ArGLABRA2_like 330 559 - -
Phac10g01057 829 MobiDBLite consensus disorder prediction 1 43 - -
Phac10g01057 829 MobiDBLite consensus disorder prediction 92 108 - -
Phac10g01057 829 FunFam Homeobox-leucine zipper protein GLABRA 2 335 559 - -
Phac10g01057 829 SUPERFAMILY Bet v1-like 328 560 - -
Phac10g01057 829 MobiDBLite consensus disorder prediction 760 776 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01057 Phac-Chr10 31868265 31875113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01057 1 829 Homeobox Transcription Factor Family AT3G61150 65.316 0.0 1046
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Phac10g01057 START 1.7e-57 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01057 K09338 - gmx:100811873 1473.37