Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01039 ATGGACAATTATGGGTCTTCACAACATCCATATAGGTATCCAAACCCGTATTGGTACCCTCGCAACACCCCTCCATATGCACCACCACCACCACAACCACCGTATCCATATCCATCAAATCCTCCAGATACCTTCAACTACTCATACCCCCCACCTCCTCCACCACCCTCAGCACCTTATTCTAGCCACACAGACCATTCCTCATACCCTCCTCCTCCACCACCACCACCTCATGATTCCTTTGACTTTCCTATGCCTCAATCACCCAATCCTTACCCTCAACAAGGTCCTCCAGAATGGAGTGTCACAGGAGGTGAAATACCCCAAACTAGTGATAGTTATAACCCTGTCTGTTCTATTTACCCTCCTTTGGATGATGGCATGAGCATTATCAGGCATTCTGATACCCCAAGTACACTAAACCCTCGACAAGGTTCTCCAGAATGGAGTGTCACAGGAGGTGAAATACCCCAAACTAGTGATAGTTATAACCCCGTCTGTTCTATTTACCCTCCTTTGGATGATGGCATGAGCATTATCAGGCATTCTGATACCCCAAGTACACTAAACCCTCGACAAGGTTCTCCAGAATGGAGTGTCACAGGAGGTGAAATACCCCAAACTAGTGATAGTTATAACCCTGTCTGTTCTATTTACCCTCCTTTGGATGATGGCATGAGCATTATCAGGCTTTCTGATACCCCAAGTACACTTTCATTGTTGACAAATTCCCCTTCAATTTCAAGATATGATAGAGATGAGTTTTATGGTGGCTCTATCTACTCCCCCTCAGATTTGGATCAGGAAGACCCTACTAGACTTTCTGCTCAATCTGATGACTCAATGAATAATCAGAGCATGCAGATTGTCCCAGTTCAGAGCAAATCGTCTCTGCCAGTTCTGCTCCTGCATGGGAATTTAGATATTTGGGTTCATCGAGCCAAACACCTTCCAAACATGGACATGTTCCATAAGACTTTGGGAGATGTGTTTGGGAGGTTTCCTGTAAATGTCAACAAGATGGATGGAACGGTGAGCCGAAAGATTACCAGTGATCCTTATGTAACAATTTCTGTGTCTAATGCTGTAATTGGGAGGACTTTTGTGCTTAGCAATAGTGAAAACCCTGTGTGGGAGCAACATTTCTATGTTCCTGTTGCGCATCATGTAGCTGAAGTTCATTTTGTTGTGAAGGACAGTGATGTGGTGGGTTCACAGCTTATTGGTATTGTGGCAATTCCAGCTGAACAAATATACTCAGGGGAAAAGATACAAGGGACCTACCCCATTTTGAATAGCAGTGGGAAGCCTTGTAAGCCAGGTGCTGTCTTGGAATTATCCATTCAGTACATTCCAATGGAGAAACTTATCACTTATCATCAAGGAGTTGGAGCTGGTCCTGAATATTTTGGGGTTTCTGGCACGTATTTTCCATTGAGGAAAGGTGGAACGGTAACTCTGTATCAAGATGCTCATGTCCCAGATGGTTGTCTACCTAAAGTTATGCTTGAGCATCGCATGCATTATACTCATGGAAAGTGTTGGCATGACATCTTTGATGCCATACGTGCAGCTCAGAGATTGGTTTACATTACGGGGTGGTCAGTGTGGCACAAAGTTAGGTTGGTAAGGGATGCTGGAAATGCAAGAAATTACAACCTGGGTGAACTTCTAAGGGCTAAGTCATCGGAGGGAGTAAGAGTGCTTCTCCTTGTATGGGATGACCCTACATCAAGAAGCATTCTTGGTTACAAAATGGATGGTGTAATGGCAACTCATGACGAGGAAACTAGACGATTTTTCAAGCACTCTTCTGTGCAAGTGCTGCTTTGTCCTCGCATTGCTGGAAAACGACACAGCTGGGCCAAACAAAAGGAAGTTGGAACAATATATACACATCATCAGAAAACTGTAATTGTGGATGCTGATGCTGGAAATGGCAAAAGAAAAATTGTAGCATTTGTTGGTGGACTTGATTTGTGCGATGGGCGATATGATGATCCCCACCATCCTCTCTTTAGGTCACTGCAGACACTGCATAAGGATGACTATCACAACCCTACTTTCACGGGTAGTACTGGTGGCTGTCCACGGGAGCCATGGCATGACTTACATTCTAAAATTGATGGTCCAGCAGCTTATGATGTTTTGACCAATTTCGAGGAGCGCTGGTTAAGAGCTGCAAAACCTGAAGGGGTTAAAAAATTTACAAGTTCATATGATGATGCATTGCTTAAGCTAGACAGAATAAAAGATATTATCAGTTCAACTGATGATCTTAATTTTAATGAGGATAATCCTGCATCATGGCATGTTCAGATATTTCGTTCAATTGATTCAAATTCTGTCATGGGATTTCCAAAGGAGCCAAAAGATGCATCAAGTGTGAATCTAGTATGTGGAAAGAATGTGCTGATTGACATGAGTATACATACAGCATATATAAAGGCCATTCGCGCTGCACAACATTACATTTATATTGAGAATCAATATTTCATTGGGTCTTCATATAATTGGAGTCAATATAAAGACCTCGGTATGCAACTCTTTATTCTGAACATGTTCGCCTTTTGCTTCAAGAATTCCTTCTTTTACTCTGCTGAAGATTTTGAAGAGCATAAATTGTTATGGTATATCAGTTTTTATAAAGGATAA 2655 0.4245 MDNYGSSQHPYRYPNPYWYPRNTPPYAPPPPQPPYPYPSNPPDTFNYSYPPPPPPPSAPYSSHTDHSSYPPPPPPPPHDSFDFPMPQSPNPYPQQGPPEWSVTGGEIPQTSDSYNPVCSIYPPLDDGMSIIRHSDTPSTLNPRQGSPEWSVTGGEIPQTSDSYNPVCSIYPPLDDGMSIIRHSDTPSTLNPRQGSPEWSVTGGEIPQTSDSYNPVCSIYPPLDDGMSIIRLSDTPSTLSLLTNSPSISRYDRDEFYGGSIYSPSDLDQEDPTRLSAQSDDSMNNQSMQIVPVQSKSSLPVLLLHGNLDIWVHRAKHLPNMDMFHKTLGDVFGRFPVNVNKMDGTVSRKITSDPYVTISVSNAVIGRTFVLSNSENPVWEQHFYVPVAHHVAEVHFVVKDSDVVGSQLIGIVAIPAEQIYSGEKIQGTYPILNSSGKPCKPGAVLELSIQYIPMEKLITYHQGVGAGPEYFGVSGTYFPLRKGGTVTLYQDAHVPDGCLPKVMLEHRMHYTHGKCWHDIFDAIRAAQRLVYITGWSVWHKVRLVRDAGNARNYNLGELLRAKSSEGVRVLLLVWDDPTSRSILGYKMDGVMATHDEETRRFFKHSSVQVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDADAGNGKRKIVAFVGGLDLCDGRYDDPHHPLFRSLQTLHKDDYHNPTFTGSTGGCPREPWHDLHSKIDGPAAYDVLTNFEERWLRAAKPEGVKKFTSSYDDALLKLDRIKDIISSTDDLNFNEDNPASWHVQIFRSIDSNSVMGFPKEPKDASSVNLVCGKNVLIDMSIHTAYIKAIRAAQHYIYIENQYFIGSSYNWSQYKDLGMQLFILNMFAFCFKNSFFYSAEDFEEHKLLWYISFYKG* 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01039 884 Pfam C2 domain 305 430 IPR000008 -
Phac10g01039 884 MobiDBLite consensus disorder prediction 22 115 - -
Phac10g01039 884 CDD C2_plant_PLD 300 451 - -
Phac10g01039 884 Pfam Phospholipase D Active site motif 630 664 IPR001736 GO:0003824
Phac10g01039 884 MobiDBLite consensus disorder prediction 265 281 - -
Phac10g01039 884 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 629 664 IPR001736 GO:0003824
Phac10g01039 884 SUPERFAMILY Phospholipase D/nuclease 514 728 - -
Phac10g01039 884 FunFam Phospholipase D delta 300 446 - -
Phac10g01039 884 Gene3D C2 domain 301 439 IPR035892 -
Phac10g01039 884 MobiDBLite consensus disorder prediction 260 281 - -
Phac10g01039 884 SUPERFAMILY Phospholipase D/nuclease 787 841 - -
Phac10g01039 884 FunFam Phospholipase D delta 505 743 - -
Phac10g01039 884 Gene3D Endonuclease Chain A 499 746 - -
Phac10g01039 884 MobiDBLite consensus disorder prediction 22 96 - -
Phac10g01039 884 ProSiteProfiles C2 domain profile. 287 428 IPR000008 -
Phac10g01039 884 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 303 453 IPR035892 -
Phac10g01039 884 PANTHER PHOSPHOLIPASE D 297 849 IPR015679 -
Phac10g01039 884 SMART C2_3c 306 427 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01039 Phac-Chr10 31576198 31585278 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01039 210 851 Phospholipase D Gene Family (Wang group) AT2G42010 70.706 0.0 933
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01039 K01115 - gmx:100805294 1091.26