Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01037 ATGGACATGTTCCACAAGACTTTGGGAGATGTGTTTGGGAGGTTGCCTGTAAATGTCAACAAGGTGGATGGGACAGTGAGCCGAAGATTACTAGTGATTCTCATTGAAAACGTTGTGTGGGAGCAACATTTCTATGTTCCTATTGCACATCATGTAGCTGAAGCTCATTTTGTTGTGAAAGACAGTGATTTGGTGGGTTCAGAGGTCATAGGTGTTGTTGCACTTCTAGCTGAACAAATATACTCAGGGGAAAATATACAAGGGACCTACCCTATTCTGAATAGCAGTGGGAAGCCTTGTAAGCCAGGTATTGTCTTTAGGTTATCCATTCAGTACATTCCAATGGAGAAACTTATCACTTATCATCAAGGAGTTGGAGCTAGTCCCGATTATTTTGCAGTTCTTGGCACATATTTTCCATTGAGGGAAGGTGGAACGGATGGTGTAATGGCAAATCATGACGAGGAAACTAGACAATTTTTCAAACACTCTTCTGTGCAAGTGCTGCTTTGTCCTCGCATTGGTGTAAAACGACGTAGTTGGGTCAAACAAAAGGAAGTTGAAACAATATACACACATCATCAGAAAACTATAATTGTGGATGCTGATGCTGGAAATTACAAAAGAAAAATTGTTGCCTTTGTTGGTGGACTAGATTTATGCGATGGGCGATATGATAATCCCCACCATCCTCTCTTTAATACACTGCAGACACTGCATAAGGATGACTATCACAACCCTACTTTCATGGCCACAAAATAA 762 0.4094 MDMFHKTLGDVFGRLPVNVNKVDGTVSRRLLVILIENVVWEQHFYVPIAHHVAEAHFVVKDSDLVGSEVIGVVALLAEQIYSGENIQGTYPILNSSGKPCKPGIVFRLSIQYIPMEKLITYHQGVGASPDYFAVLGTYFPLREGGTDGVMANHDEETRQFFKHSSVQVLLCPRIGVKRRSWVKQKEVETIYTHHQKTIIVDADAGNYKRKIVAFVGGLDLCDGRYDNPHHPLFNTLQTLHKDDYHNPTFMATK* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01037 253 Pfam Phospholipase D Active site motif 190 224 IPR001736 GO:0003824
Phac10g01037 253 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 189 224 IPR001736 GO:0003824
Phac10g01037 253 Pfam C2 domain 37 92 IPR000008 -
Phac10g01037 253 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 37 115 IPR035892 -
Phac10g01037 253 SUPERFAMILY Phospholipase D/nuclease 146 234 - -
Phac10g01037 253 PANTHER PHOSPHOLIPASE D 25 145 IPR015679 -
Phac10g01037 253 Gene3D Endonuclease Chain A 143 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01037 Phac-Chr10 31546538 31548419 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01037 146 252 Phospholipase D Gene Family (Wang group) AT2G42010 79.439 4.55e-55 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01037 K01115 - gmx:100805294 208.764