Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phac10g01035 | ATGGAAATGGTGAGCCTGAAGATTCCAATTGATCCTTATGTGACAATTTCTTTGCCAGGTGCTATAATCGGGAGGACTTTTGTGATTAGCAATAGTCAAAACCCTGTGTGGGATCAACATTTCTATCTTCCTGTTGCACATCAAGCTGCAGAAGTACATTTTGTTGTGAAGGACAGTGATGTGGTGGGTTCACAGCTCATTGGCATTGTGGCAATTCCTGTGGAACAAATATACTCTGGGGAAAAGGTACAAGGGACCTACCCTATCCTGAATTTCAAGGGTAAGCCCTGTAAGCCAGGGGCTGTCTTGAGGTTTTCCATTCAGTACATTCCAATGGAGAAGCTTGTCATTTATCATCAAGGAGTTGGAGCTGGTCCTGACTACCATGGGGTGACTGGCACATACTTTCCATTGAGGAAAGGTGGAACGGTTACTCTATATCAAGATGCCCATGTTCCAGATGGTTACCTCCCTAATGTTGTGCTTGACCATGGCATGTATTATGCCCATGGAAAGTGTTGGGTTGACATCTTTGATGCCATATATCAAGCTCGACATTTAATTTACATTACTGGGTGGTCAGTGCATCACCGAGTTAGGTTGGTAAGGGATGCTGGCCATGCATCAAATTTCACCCTGGGTGATCTTTTGAGGTCTAAGTCACAGGAGGGAGTAAGAGTGCTTCTTCTTCTTTGGAAGTACCCTACATCAAGAAGCATTCTCAGTTACCAAACGTTTTATTGA | 744 | 0.4395 | MEMVSLKIPIDPYVTISLPGAIIGRTFVISNSQNPVWDQHFYLPVAHQAAEVHFVVKDSDVVGSQLIGIVAIPVEQIYSGEKVQGTYPILNFKGKPCKPGAVLRFSIQYIPMEKLVIYHQGVGAGPDYHGVTGTYFPLRKGGTVTLYQDAHVPDGYLPNVVLDHGMYYAHGKCWVDIFDAIYQARHLIYITGWSVHHRVRLVRDAGHASNFTLGDLLRSKSQEGVRVLLLLWKYPTSRSILSYQTFY* | 248 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phac10g01035 | 247 | SMART | C2_3c | 5 | 86 | IPR000008 | - | |
| Phac10g01035 | 247 | ProSiteProfiles | C2 domain profile. | 1 | 87 | IPR000008 | - | |
| Phac10g01035 | 247 | CDD | C2_plant_PLD | 7 | 110 | - | - | |
| Phac10g01035 | 247 | Gene3D | C2 domain | 4 | 117 | IPR035892 | - | |
| Phac10g01035 | 247 | Pfam | C2 domain | 10 | 89 | IPR000008 | - | |
| Phac10g01035 | 247 | SUPERFAMILY | Phospholipase D/nuclease | 139 | 238 | - | - | |
| Phac10g01035 | 247 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 10 | 113 | IPR035892 | - | |
| Phac10g01035 | 247 | PANTHER | PHOSPHOLIPASE D | 7 | 241 | IPR015679 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phac10g01035 | Phac-Chr10 | 31538498 | 31540058 | Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Phac10g01035 | 4 | 245 | Phospholipase D Gene Family (Wang group) | AT2G42010 | 74.897 | 7.73e-125 | 378 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Phac10g01035 | K01115 | - | gmx:100805294 | 407.527 |