Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01018 ATGCAGCATCTGAAGCAAGAAGCAGCAAATATGATGAAGAAGATTGAACTTCTTGAAGCTGCAAAACGGAAATTCTTGGGAGAAGGTTTAGGGTCTGGCTCCATTGAGGAATTGCAACGAATAGAACAACAGTTGGAGAGGAGTTTAATTAATGTTCGAGCAAGAAAGCTCCAGGTTTTCATGGAACAAATTCAGCAACTGAAAGAAAAGGAAAAAGCCCTAATTGATGAAAATGCCAGGCTCTCTGAGAAGCATGGCATCCATCTACAGCTACCAACAAAGGATCAGAATGAAACTCAACCCCAATACTGTGCAGAAAGTAGCCCAAGTTCAGATGTGGAGACTGAATTATTCATTGGACTTCCAGATACAAGAACAAGACGCCTCTCTCATCAGGTTTAG 402 0.4154 MQHLKQEAANMMKKIELLEAAKRKFLGEGLGSGSIEELQRIEQQLERSLINVRARKLQVFMEQIQQLKEKEKALIDENARLSEKHGIHLQLPTKDQNETQPQYCAESSPSSDVETELFIGLPDTRTRRLSHQV* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01018 133 MobiDBLite consensus disorder prediction 92 110 - -
Phac10g01018 133 Pfam K-box region 2 84 IPR002487 GO:0003700|GO:0005634|GO:0006355
Phac10g01018 133 ProSiteProfiles K-box domain profile. 1 91 IPR002487 GO:0003700|GO:0005634|GO:0006355
Phac10g01018 133 Coils Coil 35 55 - -
Phac10g01018 133 Coils Coil 57 84 - -
Phac10g01018 133 MobiDBLite consensus disorder prediction 87 110 - -
Phac10g01018 133 Coils Coil 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01018 Phac-Chr10 31292156 31304060 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01018 1 72 MADS-box Gene Family AT2G45660 75.000 7.16e-30 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01018 - - gmx:100807963 190.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac10g01018 10 31292156 31304060 Phac10g01018 10 31292156 31304060 ECH