Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00972 ATGGAAGCTAAGCCTCTTAGGATTGTTCCCTCTTCACGCAACACTTCTGGGGTAGGAGGTGGACCCCAAAAGAAGATTGACATTGGACACGCGATGGAAGGTGGTGGTGGTAGTGGTAGTGTTGTTGACGAGAGAAAGAGGGTTGTTATGGTCAAGAAAGAGAAAGAGAACTCTTCCAACAGTGTTGAACTTCATCTTGGGGTTGATGCTTCTCATTCTGCGCCACCAGAAATAAACCATGTGATCACTGAAGCTCAGAGGCGAGAGCTTCACCACCAAGTTTTCATCTTCAACCACTTGGCTTATAAACTTCCTCCTCCTCAACACCTTGTGGAATTCCCAAGCAACATGTCAGAATACAGTTTCCTGGGTTTTGATCATGGGAGTATGGTGGATCCAGAACCTCATAGGTGTAGAAGAACTGATGGAAAGAAATGGAGGTGCAGTAAGAGTGTAGTGCCTTGTCAAAAGTACTGTGAAAGGCACATGCATAGAGGTCGAAATCGTTCAAGAAAGCCTGTGGAAACAACTCAACTTAACTCGACTTTGCCAACAAAACCTTCTAGCAAGTCATCTACCAAATCAGCCTCAAAGACAGTATTTGAAATTTCAAATCCAAACCTTATTATGGCCATGCAACCTACTGACACACCTTCCAGTACCCCATCAAAGAGCCTCACCATTGACAACTGCTCTTCTATGAACAGGTCTAAAATTATCGCCAGGGCTGCCGACTACCTCATGGTGTTTTCTTCCGCGGCTGCAGTGTCCCCTGGCTGCACTCTTGCCACTTCTGTTGCCCCTAAGGCGGCGGCAACATTCAGCAGTGTGGCATCTGTAGCTTCGGATAACAAAAGTTGCCTAAAGATGTGCCAGAAAGATAACCAGTCCAAGAGCTGTGTCAGTAACAACACAGGTAATAGAAGTGATGGGAAAGGAAGCATTGTTGGTGATTCTAATAGCGTCTCTACAGGAATAAGCTTCTCCCCAACAAGTGTTCTTCAAGTTTTTGGTAACAACCCTTCTTACCTCAATGACAAAACCAACATAGAACCTGCTGCACCCGATAGGTGTCGGAGAACAGACGGCAAGAAGTGGCAATGCAAGAGTGCTGTTCTTCCTGGTCAGAAGTACTGTGCCACACACATGCACAGAGGTGCTAAAAAGCGTTTTGCAAACCATGAAATAGAAGCAGCAGCAGCTACTACTACAACTGCTTGTTCTGCCGCTTCCGGTGCACGCTTGCCTTACTCTCCAGCCACAACCAACATGCACCAAAAGCATTCTGCAATTCCAAGTACAAATCTTTCCATGTCAGTCCCAGCAAGTGCTCCTTTCATACAATGCAATGAGAAAGGCCCCAGTAGCAGTGACACCGATACCACCATCAGTGACACCTTGCAAGAGTGTAGCTATACTTCTTTCTGA 1428 0.4615 MEAKPLRIVPSSRNTSGVGGGPQKKIDIGHAMEGGGGSGSVVDERKRVVMVKKEKENSSNSVELHLGVDASHSAPPEINHVITEAQRRELHHQVFIFNHLAYKLPPPQHLVEFPSNMSEYSFLGFDHGSMVDPEPHRCRRTDGKKWRCSKSVVPCQKYCERHMHRGRNRSRKPVETTQLNSTLPTKPSSKSSTKSASKTVFEISNPNLIMAMQPTDTPSSTPSKSLTIDNCSSMNRSKIIARAADYLMVFSSAAAVSPGCTLATSVAPKAAATFSSVASVASDNKSCLKMCQKDNQSKSCVSNNTGNRSDGKGSIVGDSNSVSTGISFSPTSVLQVFGNNPSYLNDKTNIEPAAPDRCRRTDGKKWQCKSAVLPGQKYCATHMHRGAKKRFANHEIEAAAATTTTACSAASGARLPYSPATTNMHQKHSAIPSTNLSMSVPASAPFIQCNEKGPSSSDTDTTISDTLQECSYTSF* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00972 475 MobiDBLite consensus disorder prediction 297 316 - -
Phac10g00972 475 PANTHER GROWTH-REGULATING FACTOR 5 332 445 IPR031137 GO:0005634|GO:0006351|GO:0032502
Phac10g00972 475 ProSiteProfiles QLQ domain profile. 81 116 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phac10g00972 475 MobiDBLite consensus disorder prediction 173 197 - -
Phac10g00972 475 Pfam WRC 355 390 IPR014977 -
Phac10g00972 475 Pfam WRC 133 175 IPR014977 -
Phac10g00972 475 MobiDBLite consensus disorder prediction 164 197 - -
Phac10g00972 475 MobiDBLite consensus disorder prediction 1 41 - -
Phac10g00972 475 ProSiteProfiles WRC domain profile. 132 176 IPR014977 -
Phac10g00972 475 ProSiteProfiles WRC domain profile. 352 397 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00972 Phac-Chr10 30093264 30096984 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00972 349 440 GRF Transcription Factor Family AT4G37740 34.783 7.32e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00972 - - pvu:PHAVU_010G048400g 838.95