Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00971 ATGGAAGCTAAGCCTCTTAGGATTGTTCCCTCTTCACGCAACACTTCTGGGGTAGGAGGTGGACCCCAAAAGAAGATTGACATTGGACACGCGATGGAAGGTGGTGGTGGTAGTGGTAGTGTTGTTGACGAGAGAAAGAGGGTTGTTATGGTCAAGAAAGAGAAAGAGAACTCTTCCAACAGTGTTGAACTTCATCTTGGGGTTGATGCTTCTCATTCTGCGCCACCAGAAATAAACCATGTGATCACTGAAGCTCAGAGGCGAGAGCTTCACCACCAAGTTTTCATCTTCAACCACTTGGCTTATAAACTTCCTCCTCCTCAACACCTTGTGGAATTCCCAAGCAACATGTCAGAATACAGTTTCCTGGGTTTTGATCATGGGAGTATGGTGGATCCAGAACCTCATAGGTGTAGAAGAACTGATGGAAAGAAATGGAGGTGCAGTAAGAGTGTAGTGCCTTGTCAAAAGTACTGTGAAAGGCACATGCATAGAGGTCGAAATCGTTCAAGAAAGCCTGTGGAAACAACTCAACTTAACTCGACTTTGCCAACAAAACCTTCTAGCAAGTCATCTACCAAATCAGCCTCAAAGACAGTATTTGAAATTTCAAATCCAAACCTTATTATGGCCATGCAACCTACTGACACACCTTCCAGTACCCCATCAAAGAGCCTCACCATTGACAACTGCTCTTCTATGAACAGGTCTAAAATTATCGCCAGGGCTGCCGACTACCTCATGGTGTTTTCTTCCGCGGCTGCAGTGTCCCCTGGCTGCACTCTTGCCACTTCTGTTGCCCCTAAGGCGGCGGCAACATTCAGCAGTGTGGCATCTGTAGCTTCGGATAACAAAAGTTGCCTAAAGATGTGCCAGAAAGATAACCAGTCCAAGAGCTGTGTCAGTAACAACACAGGTAATAGAAGTGATGGGAAAGGAAGCATTGTTGGTGATTCTAATAGCGTCTCTACAGGAATAAGCTTCTCCCCAACAAGTGTTCTTCAAGGTAATTTTGATGTAGTTGGTTGCAATAATTTATGCATTTTTCACTATATTTTGTAG 1062 0.4463 MEAKPLRIVPSSRNTSGVGGGPQKKIDIGHAMEGGGGSGSVVDERKRVVMVKKEKENSSNSVELHLGVDASHSAPPEINHVITEAQRRELHHQVFIFNHLAYKLPPPQHLVEFPSNMSEYSFLGFDHGSMVDPEPHRCRRTDGKKWRCSKSVVPCQKYCERHMHRGRNRSRKPVETTQLNSTLPTKPSSKSSTKSASKTVFEISNPNLIMAMQPTDTPSSTPSKSLTIDNCSSMNRSKIIARAADYLMVFSSAAAVSPGCTLATSVAPKAAATFSSVASVASDNKSCLKMCQKDNQSKSCVSNNTGNRSDGKGSIVGDSNSVSTGISFSPTSVLQGNFDVVGCNNLCIFHYIL* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00971 353 ProSiteProfiles QLQ domain profile. 81 116 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phac10g00971 353 MobiDBLite consensus disorder prediction 173 197 - -
Phac10g00971 353 MobiDBLite consensus disorder prediction 164 197 - -
Phac10g00971 353 Pfam WRC 133 175 IPR014977 -
Phac10g00971 353 PANTHER GROWTH-REGULATING FACTOR 5 50 282 IPR031137 GO:0005634|GO:0006351|GO:0032502
Phac10g00971 353 MobiDBLite consensus disorder prediction 1 41 - -
Phac10g00971 353 ProSiteProfiles WRC domain profile. 132 176 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00971 Phac-Chr10 30093264 30096984 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00971 82 175 GRF Transcription Factor Family AT4G37740 50.467 6.62e-25 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00971 - - pvu:PHAVU_010G048400g 580.482