Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00970 ATGGAAGCTAAGCCTCTTAGGATTGTTCCCTCTTCACGCAACACTTCTGGAGGTGGACCCCAAAAGAAGATTGACATTGGACACGCGATGGAAGGTGGTGGTGGTAGTGGTAGTGTTGTTGACGAGAGAAAGAGGGTTGTTATGGTCAAGAAAGAGAAAGAGAACTCTTCCAACAGTGTTGAACTTCATCTTGGGGTTGATGCTTCTCATTCTGCGCCACCAGAAATAAACCATGTGATCACTGAAGCTCAGAGGCGAGAGCTTCACCACCAAGTTTTCATCTTCAACCACTTGGCTTATAAACTTCCTCCTCCTCAACACCTTGTGGAATTCCCAAGCAACATGTCAGAATACAGTTTCCTGGGTTTTGATCATGGGAGTATGGTGGATCCAGAACCTCATAGGTGTAGAAGAACTGATGGAAAGAAATGGAGGTGCAGTAAGAGTGTAGTGCCTTGTCAAAAGTACTGTGAAAGGCACATGCATAGAGGTCGAAATCGTTCAAGAAAGCCTGTGGAAACAACTCAACTTAACTCGACTTTGCCAACAAAACCTTCTAGCAAGTCATCTACCAAATCAGCCTCAAAGACAGTATTTGAAATTTCAAATCCAAACCTTATTATGGCCATGCAACCTACTGACACACCTTCCAGTACCCCATCAAAGAGCCTCACCATTGACAACTGCTCTTCTATGAACAGGTCTAAAATTATCGCCAGGGCTGCCGACTACCTCATGGTGTTTTCTTCCGCGGCTGCAGTGTCCCCTGGCTGCACTCTTGCCACTTCTGTTGCCCCTAAGGCGGCGGCAACATTCAGCAGTGTGGCATCTGTAGCTTCGGATAACAAAAGTTGCCTAAAGATGTGCCAGAAAGATAACCAGTCCAAGAGCTGTGTCAGTAACAACACAGGTAATAGAAGTGATGGGAAAGGAAGCATTGTTGGTGATTCTAATAGCGTCTCTACAGGAATAAGCTTCTCCCCAACAAGTGTTCTTCAAGGTAATTTTGATGTAGTTGGTTGCAATAATTTATGCATTTTTCACTATATTTTGTAG 1056 0.4451 MEAKPLRIVPSSRNTSGGGPQKKIDIGHAMEGGGGSGSVVDERKRVVMVKKEKENSSNSVELHLGVDASHSAPPEINHVITEAQRRELHHQVFIFNHLAYKLPPPQHLVEFPSNMSEYSFLGFDHGSMVDPEPHRCRRTDGKKWRCSKSVVPCQKYCERHMHRGRNRSRKPVETTQLNSTLPTKPSSKSSTKSASKTVFEISNPNLIMAMQPTDTPSSTPSKSLTIDNCSSMNRSKIIARAADYLMVFSSAAAVSPGCTLATSVAPKAAATFSSVASVASDNKSCLKMCQKDNQSKSCVSNNTGNRSDGKGSIVGDSNSVSTGISFSPTSVLQGNFDVVGCNNLCIFHYIL* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00970 351 ProSiteProfiles QLQ domain profile. 79 114 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phac10g00970 351 PANTHER GROWTH-REGULATING FACTOR 5 48 280 IPR031137 GO:0005634|GO:0006351|GO:0032502
Phac10g00970 351 MobiDBLite consensus disorder prediction 171 195 - -
Phac10g00970 351 MobiDBLite consensus disorder prediction 162 195 - -
Phac10g00970 351 ProSiteProfiles WRC domain profile. 130 174 IPR014977 -
Phac10g00970 351 MobiDBLite consensus disorder prediction 1 39 - -
Phac10g00970 351 Pfam WRC 131 173 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00970 Phac-Chr10 30093264 30096984 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00970 80 173 GRF Transcription Factor Family AT4G37740 50.467 5.92e-25 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00970 - - pvu:PHAVU_010G048400g 585.489