Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00969 ATGGAAGCTAAGCCTCTTAGGATTGTTCCCTCTTCACGCAACACTTCTGGAGGTGGACCCCAAAAGAAGATTGACATTGGACACGCGATGGAAGGTGGTGGTGGTAGTGGTAGTGTTGTTGACGAGAGAAAGAGGGTTGTTATGGTCAAGAAAGAGAAAGAGAACTCTTCCAACAGTGTTGAACTTCATCTTGGGGTTGATGCTTCTCATTCTGCGCCACCAGAAATAAACCATGTGATCACTGAAGCTCAGAGGCGAGAGCTTCACCACCAAGTTTTCATCTTCAACCACTTGGCTTATAAACTTCCTCCTCCTCAACACCTTGTGGAATTCCCAAGCAACATGTCAGAATACAGTTTCCTGGGTTTTGATCATGGGAGTATGGTGGATCCAGAACCTCATAGGTGTAGAAGAACTGATGGAAAGAAATGGAGGTGCAGTAAGAGTGTAGTGCCTTGTCAAAAGTACTGTGAAAGGCACATGCATAGAGGTCGAAATCGTTCAAGAAAGCCTGTGGAAACAACTCAACTTAACTCGACTTTGCCAACAAAACCTTCTAGCAAGTCATCTACCAAATCAGCCTCAAAGACAGTATTTGAAATTTCAAATCCAAACCTTATTATGGCCATGCAACCTACTGACACACCTTCCAGTACCCCATCAAAGAGCCTCACCATTGACAACTGCTCTTCTATGAACAGGTCTAAAATTATCGCCAGGGCTGCCGACTACCTCATGGTGTTTTCTTCCGCGGCTGCAGTGTCCCCTGGCTGCACTCTTGCCACTTCTGTTGCCCCTAAGGCGGCGGCAACATTCAGCAGTGTGGCATCTGTAGCTTCGGATAACAAAAGTTGCCTAAAGATGTGCCAGAAAGATAACCAGTCCAAGAGCTGTGTCAGTAACAACACAGGTAATAGAAGTGATGGGAAAGGAAGCATTGTTGGTGATTCTAATAGCGTCTCTACAGGAATAAGCTTCTCCCCAACAAGTGTTCTTCAAGTTTTTGGTAACAACCCTTCTTACCTCAATGACAAAACCAACATAGAACCTGCTGCACCCGATAGGTGTCGGAGAACAGACGGCAAGAAGTGGCAATGCAAGAGTGCTGTTCTTCCTGGTCAGAAGTACTGTGCCACACACATGCACAGAGGTGCTAAAAAGCGTTTTGCAAACCATGAAATAGAAGCAGCAGCAGCTACTACTACAACTGCTTGTTCTGCCGCTTCCGGTGCACGCTTGCCTTACTCTCCAGCCACAACCAACATGCACCAAAAGCATTCTGCAATTCCAAGTACAAATCTTTCCATGTCAGTCCCAGCAAGTGCTCCTTTCATACAATGCAATGAGAAAGGCCCCAGTAGCAGTGACACCGATACCACCATCAGTGACACCTTGCAAGAGTGTAGCTATACTTCTTTCTGA 1422 0.4606 MEAKPLRIVPSSRNTSGGGPQKKIDIGHAMEGGGGSGSVVDERKRVVMVKKEKENSSNSVELHLGVDASHSAPPEINHVITEAQRRELHHQVFIFNHLAYKLPPPQHLVEFPSNMSEYSFLGFDHGSMVDPEPHRCRRTDGKKWRCSKSVVPCQKYCERHMHRGRNRSRKPVETTQLNSTLPTKPSSKSSTKSASKTVFEISNPNLIMAMQPTDTPSSTPSKSLTIDNCSSMNRSKIIARAADYLMVFSSAAAVSPGCTLATSVAPKAAATFSSVASVASDNKSCLKMCQKDNQSKSCVSNNTGNRSDGKGSIVGDSNSVSTGISFSPTSVLQVFGNNPSYLNDKTNIEPAAPDRCRRTDGKKWQCKSAVLPGQKYCATHMHRGAKKRFANHEIEAAAATTTTACSAASGARLPYSPATTNMHQKHSAIPSTNLSMSVPASAPFIQCNEKGPSSSDTDTTISDTLQECSYTSF* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00969 473 ProSiteProfiles QLQ domain profile. 79 114 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phac10g00969 473 MobiDBLite consensus disorder prediction 171 195 - -
Phac10g00969 473 Pfam WRC 131 173 IPR014977 -
Phac10g00969 473 Pfam WRC 353 388 IPR014977 -
Phac10g00969 473 MobiDBLite consensus disorder prediction 162 195 - -
Phac10g00969 473 ProSiteProfiles WRC domain profile. 130 174 IPR014977 -
Phac10g00969 473 PANTHER GROWTH-REGULATING FACTOR 5 330 442 IPR031137 GO:0005634|GO:0006351|GO:0032502
Phac10g00969 473 MobiDBLite consensus disorder prediction 1 39 - -
Phac10g00969 473 ProSiteProfiles WRC domain profile. 350 395 IPR014977 -
Phac10g00969 473 MobiDBLite consensus disorder prediction 295 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00969 Phac-Chr10 30093264 30096984 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00969 347 438 GRF Transcription Factor Family AT4G37740 34.783 7.32e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00969 - - pvu:PHAVU_010G048400g 843.958