Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00959 ATGGATTATGGAGGAAAGATTGGTGGAAGTGAAAGAGGTGGGCCTTGTGGTGCCTGCAAGTTTCTGAGGAGAAAGTGTGTGAAGGGTTGCATATTTGCACCATACTTTGACTCAGACCAAGGAACTGCACATTTTGCTGCAGTGCACAAGGTGTTTGGTGCAAGCAATGCCTCTAAGTTACTCATGAGAATCCCAGCACACAAACGTCTTGATGCTGTTGTTACTCTTTGCTATGAGGCTTTAGCTAGGGCTAGAGACCCTGTTTATGGTTGTGTTGGTCACCTCTTTGCTCTTCAACAACAGGTGATGAACTTGCAGGCTGAGTTAACCTATGTCCAAGCCCGTCTTGCCACAATGCAGCGCATGCCAATGGCAGTAGCTCCTCTTCTACACCCTCAAAGTTCTTCACCACAAACTCTTCCTTCCTCAGATCATTTGGCATCAAATGTTGACATGCAAAGTGTTCCTATTATGCACTATGATCCTCTTCAACCACATTCAGCATCGTTAGAGTTAAGCAGCATCCTTTTCAATCAATCAGATCATCAAGTGGAGGATAGGGAACTCCAAGCTTTGGCTCGAGAATTTGTGACCAAATACTTGCCCGGAGTAAGATTCCAGCAATCTAGCTCTCCCTAA 639 0.4538 MDYGGKIGGSERGGPCGACKFLRRKCVKGCIFAPYFDSDQGTAHFAAVHKVFGASNASKLLMRIPAHKRLDAVVTLCYEALARARDPVYGCVGHLFALQQQVMNLQAELTYVQARLATMQRMPMAVAPLLHPQSSSPQTLPSSDHLASNVDMQSVPIMHYDPLQPHSASLELSSILFNQSDHQVEDRELQALAREFVTKYLPGVRFQQSSSP* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00959 212 Pfam Lateral organ boundaries (LOB) domain 15 113 IPR004883 -
Phac10g00959 212 ProSiteProfiles LOB domain profile. 14 116 IPR004883 -
Phac10g00959 212 PANTHER LOB DOMAIN CONTAINING PROTEIN 12 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00959 Phac-Chr10 29787393 29792031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00959 13 210 AS2 family AT4G00210 55.607 5.19e-73 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phac10g00959 LOB 2.5e-37 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g01114 8 7833445 7837929 Phac10g00959 10 29787393 29792031 PCT