Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00955 ATGGAAGCCAGAGAAGGTATCAGTTCTGGGGTTACAGTGATAGGGGCAGAAGCTCCATCAGCTTATCATGTGGCGCCAAGAAGTGAAGCTCCAAACCAGGTTCATGTCCCTGATGGTGGCGGCATTGGTGGTGCTGCAGCTATTGGTGTCTCACCTGTGAGTGTGGGGTTGGATGGAACAGCAAAGAAGAAACGGGGTAGACCAAGGAAATATGGGCCTGATGGGTCTGTCACTATGGCATTGTCTCCCATGCCAATCTCGTCTTCTGCACCGTCTTCTAATAATTTTTCATCCGGCAAGCGGGGGAAAATGCGGGGTATGGAGTATAAGCAGTCGAAAAAACTTGGTTTGGATTATCTAGGTGACTTGAATGCATGTTCTGATGGTACAAATTTTATGCCACACATCATCACTGTCAATGCTGGTGAGGACATTACAATGAAGGTGATATCCTTCTCTCAACAAGGGCCAAGAGCTATATGTATCTTATCTGCTAATGGTGTAATTTCAAATGTTACACTTCGACAGCCTGATTCTTCTGGGGGTACTTTAACTTATGAGGGTCGTTTTGAGATACTTTCCTTGTCTGGATCATTCATGCCTACTGACAACCAAGGTACAAGAAGCAGGTCTGGTGGAATGTCGGTCTCTTTGGCTAGCCCTGATGGCCGAGTTGTAGGTGGTGGAGTTGCCGGTCTTCTTGTAGCTGCTAGCCCTGTGCAGGTGGTGGTGGGAAGCTTTTTACCAAGCAGCCAGCAAGAACAGAAACTAAAGAAGCCCAAGTCTACTGATTATGCAGCAGCAGCAGCCGCTGTTTCTCCAGTTATTGCAGTATCTCCTGCACCACCCCCTCCACCACCACCTCCAACCAATGCTGAAAAAGAGGATGTGAATATTAATGTAATGGGTGGAGCACATGTGCTGCAAAATTCTGGATCTCTTAACTCTAACCTCAGCCCTCCCAATGCCTTTAGAAGAGACAACTGGGTCAACATGCACTCTATTCCAGACTCAAGAAAGTCAGCTACTGATATTAACATATCTTTGCCTGATTGTTAA 1059 0.4665 MEAREGISSGVTVIGAEAPSAYHVAPRSEAPNQVHVPDGGGIGGAAAIGVSPVSVGLDGTAKKKRGRPRKYGPDGSVTMALSPMPISSSAPSSNNFSSGKRGKMRGMEYKQSKKLGLDYLGDLNACSDGTNFMPHIITVNAGEDITMKVISFSQQGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTDNQGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLPSSQQEQKLKKPKSTDYAAAAAAVSPVIAVSPAPPPPPPPPTNAEKEDVNINVMGGAHVLQNSGSLNSNLSPPNAFRRDNWVNMHSIPDSRKSATDINISLPDC* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00955 352 MobiDBLite consensus disorder prediction 57 104 - -
Phac10g00955 352 Pfam Plants and Prokaryotes Conserved (PCC) domain 134 247 IPR005175 -
Phac10g00955 352 SUPERFAMILY AF0104/ALDC/Ptd012-like 132 252 - -
Phac10g00955 352 FunFam AT-hook motif nuclear-localized protein 1-like 134 265 - -
Phac10g00955 352 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 26 315 IPR039605 GO:0003680
Phac10g00955 352 MobiDBLite consensus disorder prediction 81 100 - -
Phac10g00955 352 CDD DUF296 134 224 IPR005175 -
Phac10g00955 352 Gene3D - 134 265 - -
Phac10g00955 352 ProSiteProfiles PPC domain profile profile. 129 271 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00955 Phac-Chr10 29722903 29729474 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00955 10 275 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 56.949 5.22e-95 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00955 - - gmx:100793726 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac10g00955 10 29722903 29729474 Phac10g00955 10 29722903 29729474 ECH
Phac8g01117 8 7876256 7881133 Phac10g00955 10 29722903 29729474 PCT