Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00952 ATGGAAGCCAGAGAAGGTATCAGTTCTGGGGTTACAGTGATAGGGGCAGAAGCTCCATCAGCTTATCATGTGGCGCCAAGAAGTGAAGCTCCAAACCAGGTTCATGTCCCTGATGGTGGCGGCATTGGTGGTGCTGCAGCTATTGGTGTCTCACCTGTGAGTGTGGGGTTGGATGGAACAGCAAAGAAGAAACGGGGTAGACCAAGGAAATATGGGCCTGATGGGTCTGTCACTATGGCATTGTCTCCCATGCCAATCTCGTCTTCTGCACCGTCTTCTAATAATTTTTCATCCGGCAAGCGGGGGAAAATGCGGGGTATGGAGTATAAGCAGTCGAAAAAACTTGGTTTGGATTATCTAGGTGACTTGAATGCATGTTCTGATGGTACAAATTTTATGCCACACATCATCACTGTCAATGCTGGTGAGGACATTACAATGAAGGTGATATCCTTCTCTCAACAAGGGCCAAGAGCTATATGTATCTTATCTGCTAATGGTGTAATTTCAAATGTTACACTTCGACAGCCTGATTCTTCTGGGGGTACTTTAACTTATGAGGGTCGTTTTGAGATACTTTCCTTGTCTGGATCATTCATGCCTACTGACAACCAAGGTACAAGAAGCAGGTCTGGTGGAATGTCGGTCTCTTTGGCTAGCCCTGATGGCCGAGTTGTAGGTGGTGGAGTTGCCGGTCTTCTTGTAGCTGCTAGCCCTGTGCAGGTAAGTGATCTTCCTCTATTCTCAATCTTCTCAAGGGCATGTGTACCTGAATGCTTGAAAACTGAACCATATAATATTTTCCCCAAGTGTATTGAAGGGAAACTAACATGA 834 0.4592 MEAREGISSGVTVIGAEAPSAYHVAPRSEAPNQVHVPDGGGIGGAAAIGVSPVSVGLDGTAKKKRGRPRKYGPDGSVTMALSPMPISSSAPSSNNFSSGKRGKMRGMEYKQSKKLGLDYLGDLNACSDGTNFMPHIITVNAGEDITMKVISFSQQGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTDNQGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVSDLPLFSIFSRACVPECLKTEPYNIFPKCIEGKLT* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00952 277 ProSiteProfiles PPC domain profile profile. 129 268 IPR005175 -
Phac10g00952 277 MobiDBLite consensus disorder prediction 57 104 - -
Phac10g00952 277 Gene3D - 134 252 - -
Phac10g00952 277 MobiDBLite consensus disorder prediction 81 100 - -
Phac10g00952 277 CDD DUF296 134 224 IPR005175 -
Phac10g00952 277 SUPERFAMILY AF0104/ALDC/Ptd012-like 132 242 - -
Phac10g00952 277 Pfam Plants and Prokaryotes Conserved (PCC) domain 134 242 IPR005175 -
Phac10g00952 277 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 26 242 IPR039605 GO:0003680
Phac10g00952 277 FunFam AT-hook motif nuclear-localized protein 1-like 134 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00952 Phac-Chr10 29722903 29729474 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00952 10 242 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 59.004 4.43e-89 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00952 - - gmx:100793726 402.134