Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00927 ATGATGAAGGTATTAGTGACAGTTATTGCAGGGTTGATGATTATGAAGATGGTGCAAAGTGAAGAAGATGTTGATGGGATTTTGGGTGGTAAGAAAACAGTTCGTGTGACAAATGATATGACAAATGGCATTTCTGTGTTTCTTCATTGCAAATCGAGGGATGATGATCTTGGAGCACAAGTTCTTGAGAATGGACAGTATCAAGAATGGAGTTTCAGAAATAACATTGCGCACACCACTCTTTTCTGGTGTAACATGCAAGCACCCAATGTTCAAATCCATTTTGATGCTTACAGTTACAAAGAAGATAGTGCTGTCTGTGACCAATGTTACAGAAGCTTGAAGGATGATGGATTATACTTCTATAATCAGTACGAAAACAAATGGGAGAAGAAAGCTGCATGGAATACCCATGCTTTCTGA 423 0.3853 MMKVLVTVIAGLMIMKMVQSEEDVDGILGGKKTVRVTNDMTNGISVFLHCKSRDDDLGAQVLENGQYQEWSFRNNIAHTTLFWCNMQAPNVQIHFDAYSYKEDSAVCDQCYRSLKDDGLYFYNQYENKWEKKAAWNTHAF* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00927 140 PANTHER - 31 128 IPR010264 -
Phac10g00927 140 Pfam Plant self-incompatibility protein S1 33 135 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00927 Phac-Chr10 29444399 29444827 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00927 2 140 Carbohydrate Esterase AT3G16970 26.389 2.05e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00927 - - pvu:PHAVU_010G083600g 269.626