Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00926 ATGTTGAAGGAATTGGTTCTTGTGGTGTTGATTATGATGGTAAAGATGGTGCAAAGTGAAGAAGAAAGTGATGGGGTTTTAGACGGGAAGAAACATGTGCGTGTTACAAATGATTTGAACGATGGCATTCTGGTTCATCTCCATTGTCGATCGAAAGATGATGATCTTGGAGAACATGTTCTTGGCAATGGAGAGTTCCAAGAATGGACCTTCAAAGATAACATTGGTGACACCACTCTTTTTTGGTGTTCCATGGATGCATACAATGTCCAAATGAGTTTTGAAATTTATAGTGCAGTAGCTGATAATCCAAAATGTGATAAACAATGCTATAGAAGTTTGAGGACAGATGGAGCATATTTCTATAATGAATTTGGGAACACATGGGAGAAGAGACAGTCATGGAATATTCATAAACCCCCAACTACTGCTAAACCATGA 441 0.3832 MLKELVLVVLIMMVKMVQSEEESDGVLDGKKHVRVTNDLNDGILVHLHCRSKDDDLGEHVLGNGEFQEWTFKDNIGDTTLFWCSMDAYNVQMSFEIYSAVADNPKCDKQCYRSLRTDGAYFYNEFGNTWEKRQSWNIHKPPTTAKP* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00926 146 PANTHER - 29 129 IPR010264 -
Phac10g00926 146 Pfam Plant self-incompatibility protein S1 32 135 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00926 Phac-Chr10 29441733 29442195 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00926 23 136 Carbohydrate Esterase AT3G16970 26.496 3.09e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00926 - - pvu:PHAVU_010G083600g 171.4