Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00922 ATGGAAAACTCATATAGCAATTCACCATTGGTGGATCTTGTATTAGTTACCTTCTTTTATGCCTTGTTCCTACAAGGTGTTATTGCTAACATTATAGCAACTTCCAATTCCTCATCCACTAATGAGGAACAAGAAGCTTTGCTTCAGAGTAGATGGGGAGGTAGAAATATCTCAGAATATTGTAATTGGAATGGTATTGTGTGCAATGCAGCTCAAAGTGTTATAGAGATTTCAACTAAACAGTATTTCTATATTCCTTCAAATGAAGCTCATATTCAGTATTTCAATGTGGCTGCATTCCCTGATTTAATCCATCTAGATCTTAGTGGATCTGAACTCAAAGGAAATATTCCTTCAGAAATAAGTTCTCTTAAAAAGCTTGTTCATCTTGATCTGTCCTCTAATTGTCTTCAAGGTATGTTGCCTAGTTCTCTTTCAAGTCTCACTCCACTTCAGACACTTAATATTTCTAACAATTTTCTTACTGGTGTGATCCCTTCTACTTTGGGCCAATTGAAGAATTTGACCCTACTCTCCCTTGACTCAAACCAACTTAAAGGCCACATTCCTTCAGAACTAGGGAATTTAAGAGGTTTGGAGCAGTTAACTCTTTCAAATAACTCACTAAATGGCTCAATCCCTTCTACTTTAGAGCACTTGGACCATCTCAAAGTTTTGGATCTTTCTCATAATAAGATTTTTGGTGTTATACCAGAGGGGATATCTGCACTGACACAACTAACTAGTGTTCAACTATCTTGGAATCAAATAACTGGTTCCATTCCACCTGGGATTGGGAAAATCCTAAGACTTGAAAGTTTAGATATTTCCAACAACCATCTTGAGGGACCTATCCCAGATGATGTTTTGAACCATTGTTGGTGGTATATGCAGTTAAGCAACAACTCTTTAAACGGGAGCATTCCTTCTCAAGTAGGAAATATTTCATATCTAGACCTTAGTTATAATGACCTCACAGGCAACATACCTGAGGGCCTTCATTCTGTTCCTCACCTTAATTTGTCATACAATTCCTTTAATGTTTCAGATCACATTTTCTGTGGTTTTCCAAAAGACTCTTTAATTGGTAATAAGGATATGAAATATTCGTGCTCTTTGGATGTTGATATTTCCGATGCTGATATTTCTCTAGTAATGATACTTGTCTTTTCTACCTTCAGTGGTATGGTTTTTTCAATGGTTATTGTCTGTTGGGGAATTCATGTTTTCTGTCCCCTCCATAATGAGTTTGGAAATGAGCAAAGAAGAAAGAATGGAGACATGCTTTCAATTTGGAACTATGATGGTAAGATTGCATTTGAAGACATAATTAAGGCCACGGAAGACTTTGATATAAAGTACTGCATAGGAACAGGTGCTTATGGAAGTGTGTACAAAGCACAACTCCCCAGTGGCAAAATTGTTGCACTGAAAAAGCTTCACAAAGCAGAATCAGAAAATCCATCCTCTTACAAGAGCTTTTGCAATGAGACCAAGATCTTGACAGAAATTCGGCATCGTAACATCATTAAGCTTTATGGCTTCTGTTTGCATAATAAGTGTATGTTCTTGGTGTATGAGTATATGGAAAGAGGAAGCTTGTTTTGTAACTTGTCTTATGATGTGGAAGCTCAAGTGCTGAATTGGAGCAAGAGGATAAATGTTGTAAAAGAGATAGCCTATGGCTTGGCTCACATGCACCATGATTGTACCACATCCATTGTTCATCGAGACATAAGCAGCAACAACATTTTGTTAAACTCACAGTTGCAGGCTTTCATCTCAGACTTTGGTACAGCAAGACTTCTTGATTTTCATTCATCAAATCAGACTCTTCCTGCTGGTACTTATGGATATGTTGCTCCAGAATTGGCTTACACCTTGAGTGTGACCACCAAATGTGATGTGTATAGCTTTGGAGTAGTGGTTTTGGAAACAATGATGGGTAGACATCCAGCTGAATTGATTTCTTCTTTATCAGAACCAGCCATTCAGAACAAGAAGCTCAAAGATATATTGGACACACGTATTCCACTGCCATATTTTAGAAAAGATATGCAAGATATTGTGGTGGTTGTAACATTAGCATTGGCATGTTTGAGTCCCCACCCAAAATCCAGACCATCAATGCAGGAAATAGCCAATGAGCTTTTAGTTTCCAAGCCACCATTGCTTTGGCATTTTGATGGCATTTCCCTCCACCAACTCATGAACCAAAAACTATATATAATTGGTAGAACTTAG 2244 0.3766 MENSYSNSPLVDLVLVTFFYALFLQGVIANIIATSNSSSTNEEQEALLQSRWGGRNISEYCNWNGIVCNAAQSVIEISTKQYFYIPSNEAHIQYFNVAAFPDLIHLDLSGSELKGNIPSEISSLKKLVHLDLSSNCLQGMLPSSLSSLTPLQTLNISNNFLTGVIPSTLGQLKNLTLLSLDSNQLKGHIPSELGNLRGLEQLTLSNNSLNGSIPSTLEHLDHLKVLDLSHNKIFGVIPEGISALTQLTSVQLSWNQITGSIPPGIGKILRLESLDISNNHLEGPIPDDVLNHCWWYMQLSNNSLNGSIPSQVGNISYLDLSYNDLTGNIPEGLHSVPHLNLSYNSFNVSDHIFCGFPKDSLIGNKDMKYSCSLDVDISDADISLVMILVFSTFSGMVFSMVIVCWGIHVFCPLHNEFGNEQRRKNGDMLSIWNYDGKIAFEDIIKATEDFDIKYCIGTGAYGSVYKAQLPSGKIVALKKLHKAESENPSSYKSFCNETKILTEIRHRNIIKLYGFCLHNKCMFLVYEYMERGSLFCNLSYDVEAQVLNWSKRINVVKEIAYGLAHMHHDCTTSIVHRDISSNNILLNSQLQAFISDFGTARLLDFHSSNQTLPAGTYGYVAPELAYTLSVTTKCDVYSFGVVVLETMMGRHPAELISSLSEPAIQNKKLKDILDTRIPLPYFRKDMQDIVVVVTLALACLSPHPKSRPSMQEIANELLVSKPPLLWHFDGISLHQLMNQKLYIIGRT* 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00922 747 ProSitePatterns Tyrosine protein kinases specific active-site signature. 574 586 IPR008266 GO:0004672|GO:0006468
Phac10g00922 747 ProSitePatterns Protein kinases ATP-binding region signature. 456 478 IPR017441 GO:0005524
Phac10g00922 747 FunFam Nuclear pore complex protein NUP107 29 190 - -
Phac10g00922 747 SUPERFAMILY Protein kinase-like (PK-like) 432 718 IPR011009 -
Phac10g00922 747 PRINTS Leucine-rich repeat signature 220 233 - -
Phac10g00922 747 PRINTS Leucine-rich repeat signature 127 140 - -
Phac10g00922 747 SMART LRR_typ_2 196 219 IPR003591 -
Phac10g00922 747 SMART LRR_typ_2 268 292 IPR003591 -
Phac10g00922 747 SMART LRR_typ_2 172 195 IPR003591 -
Phac10g00922 747 SMART LRR_typ_2 124 147 IPR003591 -
Phac10g00922 747 SMART LRR_typ_2 220 244 IPR003591 -
Phac10g00922 747 SMART LRR_typ_2 148 171 IPR003591 -
Phac10g00922 747 Gene3D Phosphorylase Kinase; domain 1 415 528 - -
Phac10g00922 747 Gene3D Ribonuclease Inhibitor 190 375 IPR032675 -
Phac10g00922 747 FunFam Leucine-rich receptor-like protein kinase family protein 191 287 - -
Phac10g00922 747 Pfam Leucine Rich Repeat 126 148 IPR001611 GO:0005515
Phac10g00922 747 Pfam Leucine Rich Repeat 151 170 IPR001611 GO:0005515
Phac10g00922 747 Pfam Leucine Rich Repeat 270 289 IPR001611 GO:0005515
Phac10g00922 747 Pfam Protein kinase domain 454 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g00922 747 Pfam Leucine rich repeat 197 257 IPR001611 GO:0005515
Phac10g00922 747 FunFam Leucine-rich repeat receptor-like protein kinase 529 724 - -
Phac10g00922 747 Gene3D Ribonuclease Inhibitor 33 189 IPR032675 -
Phac10g00922 747 ProSiteProfiles Protein kinase domain profile. 450 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g00922 747 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 135 718 - -
Phac10g00922 747 Gene3D Transferase(Phosphotransferase) domain 1 529 722 - -
Phac10g00922 747 SUPERFAMILY L domain-like 59 346 - -
Phac10g00922 747 FunFam Leucine-rich repeat receptor protein kinase MSP1 414 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00922 Phac-Chr10 29301499 29304451 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00922 103 622 Receptor kinase-like Gene Family AT4G08850 39.083 3.84e-109 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phac10g00922 Pkinase 9.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00922 - - vun:114165534 1273.46