Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00866 ATGTCCTCCTCATCCACTTCCTTTTCACCGGACCAACACCTCTCTCCCTCCGACCAGCTCTGCTATGTCCATTGCAATTTCTGTGACACTGTCCTCGCGGTGAGTGTTCCTTGCTCCAGTTTGTTTAAGACTGTCACTGTGAGATGTGGTCATTGCACCAACCTTCTCTCAGTCAACATGCGTGGCCTGCTTCTTCCTTCAGCTAATCAGATTCACCTGGGCCACACCTTTTTCACTCCTCAAAATCTTCTGGAGGAGATTCGTAATGCACCTTCAACAAACATGGTGATGAATCAGATGCCAAACCCTAATGATTTGGTCATGCGCACCATGCGAGGAGGGCCAGAAGAAACCCCTAAGCCTCCATCTGCTAATAGACCTCCAGAAAAGAGACAGAGAGTTCCATCTGCTTACAATCGCTTCATCAAGGATGAGATCCAGCGTATCAAAGCTGGGAACCCTGATATAAGTCACAGAGAGGCCTTCAGTGCAGCTGCAAAGAATTGGGCCCATTTTCCTCACATTCATTTCGGACTTATGCCTGATCATCAACCCGTGAAGAAAGCTAATGTTCGTCAGGAAGCAGAGGATGTTCTTATCAAAGATGGGTTTTTCGCACCAGCTAATGTAGGTGTCTCTCCCTTCTAG 648 0.4769 MSSSSTSFSPDQHLSPSDQLCYVHCNFCDTVLAVSVPCSSLFKTVTVRCGHCTNLLSVNMRGLLLPSANQIHLGHTFFTPQNLLEEIRNAPSTNMVMNQMPNPNDLVMRTMRGGPEETPKPPSANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANVRQEAEDVLIKDGFFAPANVGVSPF* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00866 215 MobiDBLite consensus disorder prediction 110 134 - -
Phac10g00866 215 CDD HMG-box_SF 133 169 - -
Phac10g00866 215 SUPERFAMILY HMG-box 120 173 IPR036910 -
Phac10g00866 215 Gene3D High mobility group box domain 116 197 IPR036910 -
Phac10g00866 215 PANTHER PROTEIN YABBY 6-RELATED 1 191 IPR006780 GO:0007275
Phac10g00866 215 FunFam Axial regulator YABBY 124 196 - -
Phac10g00866 215 Pfam YABBY protein 16 179 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00866 Phac-Chr10 24912797 24915785 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00866 27 213 C2C2-YABBY Transcription Factor Family AT4G00180 63.810 1.08e-69 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Phac10g00866 YABBY 8e-74 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00866 K25796 - gmx:100781267 436.417