Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00858 ATGGCATCATTACCATCATCATCATCTTCATTTTCCTTAGTAATAATAACCCTTCTACTTGTTCCCTTTCTATTTTCCTCCATTGCCTTCTCTTACTCATTCAAAGATATTCAATCATGGTGCAACCAAACCCCTTACCCTCAACCTTGTGAGTACTACTTGACCAGCCATACCTTCAACAAACCCATCAAAAGCAAATCCGATTTTCTCCAAGTTTCCCTTCAACTTGCCCTAGAGAGAGCAGAAAGGGGCCAACTAAACACCCATTCCATAGGGCCAAAGTGCCGCAACGTCCATGAAAAATCTGCATGGACCGATTGCATTGAACTCTACGACTACACCATTCAAAGACTCAACAAAACTCTTGACCCTTACACCAAATGCACCCAAACCGACACACAAACATGGCTCAGCACAGCCCTCACAAACCTGGAAACATGCAGAACCGGGTTGTATGAACTTGGTGTCCAAGATTACATGCTACCCTTGATGTCCAATAATGTCACAAAGTTATTAAGCAACACCCTCTCTCTCAACAAGGATTCCAATTACCCCTTCAAACCACCAAGTAGCCAAGAGGGGTACCCTACATGGGTGAAGCCAGGTGATAGAAAGTTGTTGCAATCATCTTCTGCTGCTTCTCAAGCTAATGTTGTTGTGGCCAAAGATGGCTCTGGAAAGTACACAACAGTGAAAGCTGCTGTTGATGCTGCTCCATCGAGTAGCAGTGGAAGGTATGTGATATATGTTAAGAGTGGAGTATACAATGAACAAGTTGAGATCAAATCAAAGAATATAATGTTGGTCGGAGATGGAATTGGAAAAACGATAATCACAGGTAGCAAAAGTGTTGGAGGTGGCTCCACAACCTTCCGTTCAGCCACTGTTGCTGCTGTGGGTGATGGATTTATTGCTCAAGACATGACATTCAGAAACACTGCAGGAGCAGCAAATCACCAAGCAGTGGCATTCCGTTCTGGGTCAGATCTCTCAGTGTTCTACAGATGCAGTTTTGAGGGTTATCAAGACACATTGTATGTGCATTCAGAGAGGCAATTCTACAGAGAATGTGATATCTATGGCACAGTGGACTTCATCTTTGGCAATGCTGCTGTGGTACTGCAGAACTGCAACATCTATGCAAGAACCCCTCCTCAGAGAACCATCACAGTCACGGCTCAGGGTAGAACTGACCCTAACCAAAACACTGGAATCATCATCCACAACTCCAAGGTCACTGGTGCCTCAGGCTTCAACCCTAGTTCTGTGAAATCATACCTTGGCAGGCCCTGGCAGAAGTACTCAAGAACAGTGTTCATGAAGACCAACCTTGACAGTTTGATCAACCCTGCTGGTTGGATGGAATGGGATGGTAACTTTGCTTTGGACACTTTGTATTATGCAGAATATGCAAACACTGGTCCTGGCTCCAACACTGCCAATAGGGTCACTTGGAAGGGTTACCATGTTCTCACTACTGCATCACAGGCCACACCTTTCACTGTTGCCAACTTCATTGCTGGCAACTCCTGGATACCTACCACTTCTGTTCCTTTCACCTCTGGACTTTAA 1572 0.4491 MASLPSSSSSFSLVIITLLLVPFLFSSIAFSYSFKDIQSWCNQTPYPQPCEYYLTSHTFNKPIKSKSDFLQVSLQLALERAERGQLNTHSIGPKCRNVHEKSAWTDCIELYDYTIQRLNKTLDPYTKCTQTDTQTWLSTALTNLETCRTGLYELGVQDYMLPLMSNNVTKLLSNTLSLNKDSNYPFKPPSSQEGYPTWVKPGDRKLLQSSSAASQANVVVAKDGSGKYTTVKAAVDAAPSSSSGRYVIYVKSGVYNEQVEIKSKNIMLVGDGIGKTIITGSKSVGGGSTTFRSATVAAVGDGFIAQDMTFRNTAGAANHQAVAFRSGSDLSVFYRCSFEGYQDTLYVHSERQFYRECDIYGTVDFIFGNAAVVLQNCNIYARTPPQRTITVTAQGRTDPNQNTGIIIHNSKVTGASGFNPSSVKSYLGRPWQKYSRTVFMKTNLDSLINPAGWMEWDGNFALDTLYYAEYANTGPGSNTANRVTWKGYHVLTTASQATPFTVANFIAGNSWIPTTSVPFTSGL* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00858 523 PANTHER PECTINESTERASE 19 514 - -
Phac10g00858 523 FunFam Pectinesterase 211 523 - -
Phac10g00858 523 NCBIfam pectinesterase inhibitor domain 9 180 IPR006501 GO:0004857
Phac10g00858 523 ProSitePatterns Pectinesterase signature 2. 359 368 IPR033131 -
Phac10g00858 523 SMART PMEI_2 32 178 IPR006501 GO:0004857
Phac10g00858 523 Gene3D - 211 523 IPR012334 -
Phac10g00858 523 Pfam Pectinesterase 217 509 IPR000070 GO:0030599|GO:0042545
Phac10g00858 523 SUPERFAMILY Pectin lyase-like 211 522 IPR011050 -
Phac10g00858 523 ProSitePatterns Pectinesterase signature 1. 242 261 IPR018040 -
Phac10g00858 523 CDD PMEI-like_3 39 180 - -
Phac10g00858 523 Pfam Plant invertase/pectin methylesterase inhibitor 36 178 IPR006501 GO:0004857
Phac10g00858 523 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 180 IPR035513 -
Phac10g00858 523 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 181 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00858 Phac-Chr10 24660165 24664460 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00858 10 523 Carbohydrate Esterase AT2G45220 65.571 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00858 K01051 - gmx:100782892 932.939