Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00855 ATGGCCACTTATGCCACCACCACCACCTTGTTCCTCCTCCTTGGCATGGCCACCACCACCCTTTGCCTCCAAGAAAAGGGTGTCCTCCAAATGGCCCAAAATCATGTTTCTCTAGCAAAGAATTGGGTGGCAAACGCTTTGAGATTGCATGGCTTTGAAAGCCTGAGCCTTTCAGACCAAACAAGTGTTGTAGCCCTTAGAGACTGTGCCAAGCTGTACGAGGAGAGCGAGTGTAGGCTCTCTCACATGATGTCCCAAAACAACAGTTACACCAAAGAAGATGCACTCACATGGATAAGTGCTTTGATGACAAATCACAGGACCTGTTTGGATGGTCTGCAAGAAAAAGGGTATGTTCAAGCTCAGATTCTGGATACAAACTTGACCATGTCGCTTAAGCAAGCTCTTATTTTGTATTCAAAGAATAAAGGCATAGCCAAAGGACCACCACCACAGGGAACAAAATCCAAAGCTTCTGGCATTTTAGAATCATGGAGTGAAGCAAGCTATGAGCCAGACTTCACAGTGGCACAGGATGGTTCAGGAACCCACAGAACAATCCAAGCAGCAGTGAATGCACTTGCTGCAATTGGACATAATCGTCCTGCAAGAGTAATCATACATGTAAAATCAGGGATCTATAATGAGAAGGTGCAAATTGGACAGAAACTGCATAATGTGATGCTTGTAGGAGATGGCATAGACAAAACTATTGTTACTGCCAACAGAAATGTTGCTCAAGGTTCTACCACTATGGGCTCAGCCACGTTTGATGTATCAGGTGATGGATTTTGGGCAAGAGACATGACATTTGAGAACAGTGCAGGCCCAGAAAAGCACCAAGCAGTGGCACTCAAGGTTAGTTCAGACTTATCAGTGTTCTATAGGTGCAGCTTCAAAGGCTATCAAGACACTCTTTACGTTCATTCAAATCGCCAATTCTACCGTGACTGTCACATATATGGCACCATAGATTTCATATTCGGGGATGCTGCAGTGGTGTTACAGAACTGTGACATCTTAGTGAGGAAGCCAATGAGCCAGCAAGCCAACTTCATCACAGCACAAGGAAGAGATGACCCTAACGAGAACACTGGGATTGCAATCCAGAGTTGCAGGGTTAGAGCAGCATCAGAGTTTGTGGCCCTGAAGAACTCCTACAAGACATTCCTTGGAAGGCCCTGGAAGAGGTACTCAAGGACTCTGTTCCTGAAGAGTGAGTTGGATGGACTGATTGATCCAAGAGGGTGGGGTGAATGGAGTGGAAATTTTGCAGTCTCAACTTTGTTCTATGGAGAGTATATGAACACAGGAAGTGGTGCCTCTACAGAAAATAGGGTGACTTGGCCTGGTTTTCATGTGCTGAAGAGTGCTAGTGAGGCCTCACCCTTCACAGTGAACCAGTTTCTGCAAGGAGAAAGGTGGATTCCTGCTACAGGGGTGCCATTCTCTTCTGGAATATGA 1464 0.4583 MATYATTTTLFLLLGMATTTLCLQEKGVLQMAQNHVSLAKNWVANALRLHGFESLSLSDQTSVVALRDCAKLYEESECRLSHMMSQNNSYTKEDALTWISALMTNHRTCLDGLQEKGYVQAQILDTNLTMSLKQALILYSKNKGIAKGPPPQGTKSKASGILESWSEASYEPDFTVAQDGSGTHRTIQAAVNALAAIGHNRPARVIIHVKSGIYNEKVQIGQKLHNVMLVGDGIDKTIVTANRNVAQGSTTMGSATFDVSGDGFWARDMTFENSAGPEKHQAVALKVSSDLSVFYRCSFKGYQDTLYVHSNRQFYRDCHIYGTIDFIFGDAAVVLQNCDILVRKPMSQQANFITAQGRDDPNENTGIAIQSCRVRAASEFVALKNSYKTFLGRPWKRYSRTLFLKSELDGLIDPRGWGEWSGNFAVSTLFYGEYMNTGSGASTENRVTWPGFHVLKSASEASPFTVNQFLQGERWIPATGVPFSSGI* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00855 487 FunFam Pectinesterase 167 487 - -
Phac10g00855 487 Gene3D - 167 487 IPR012334 -
Phac10g00855 487 ProSitePatterns Pectinesterase signature 2. 320 329 IPR033131 -
Phac10g00855 487 SUPERFAMILY Pectin lyase-like 171 486 IPR011050 -
Phac10g00855 487 Pfam Plant invertase/pectin methylesterase inhibitor 32 121 IPR006501 GO:0004857
Phac10g00855 487 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 130 IPR035513 -
Phac10g00855 487 PANTHER PECTINESTERASE 34 477 - -
Phac10g00855 487 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 140 IPR035513 -
Phac10g00855 487 Pfam Pectinesterase 173 473 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00855 Phac-Chr10 24571295 24575301 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00855 1 487 Carbohydrate Esterase AT3G60730 54.356 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00855 K01051 - gmx:100792852 810.446