Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00814 ATGGATTCTAGGAGGCGTAAAAAAGCATCTATGCAACGCAAGTTGCAACAACTTCGATCGGTCACAAATTCTAGTGCTGTTAACAAAGCCTCCATTATTGTGGATGCCACAAGATACATAGAGGAATTGAAGCAAAAAGTGGATGGATTGAACTCTGAGCTTGGAACCGCTGAATCATCAATCTCCCAAGACGAACTACCCATGGTCACTGTAGAAACCCTAGAAAAGGGTTTCCTCATTAATGTGTTTTCAGAAAGGAATTGCCCCGGCATGCTTGTGGCAATACTCGACGCCTTTGAAGAACTGGGACTTGATGTGCTTGATGCTAGGGTTTCTTGTGAAGACACTTTCCAGCTTGAAGCTGTAGGAGGAGAAAGTCAAGAGAACGAAAGCATCGATGCCCAAGTGGTGAAGCAAGCAGTGATGCAAGCAATCCAAAACATGGATTAA 450 0.44 MDSRRRKKASMQRKLQQLRSVTNSSAVNKASIIVDATRYIEELKQKVDGLNSELGTAESSISQDELPMVTVETLEKGFLINVFSERNCPGMLVAILDAFEELGLDVLDARVSCEDTFQLEAVGGESQENESIDAQVVKQAVMQAIQNMD* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00814 149 Gene3D - 2 66 IPR036638 GO:0046983
Phac10g00814 149 CDD ACT_UUR-ACR-like 89 145 - -
Phac10g00814 149 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 5 61 IPR036638 GO:0046983
Phac10g00814 149 Coils Coil 33 60 - -
Phac10g00814 149 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 2 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00814 Phac-Chr10 19239340 19241203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00814 3 62 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 39.344 9.68e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00814 - - gmx:100499821 274.248