Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00789 ATGGAGCAAAAAGGAGGTGTGCTTATGCAACGATATGAACTAGGGAGATTATTAGGCCAAGGAACTTTTGCAAAGGTTTATCATGCTAGGAACCTCATAACTGGCATGAGTGTGGCCATAAAAATTGTTGATAAAGAGAAGATTCTGAAAGTTGGGATGATTGACCAGATTAAGCGTGAAATTTCAGTGATGAGACTAATTAGGCATCCACATGTTGCTGAGCTTTATGAGGTAATGGCCAGCAAAACCAAAATTTACTTTGTCATGGAGTATGTAAAAGGCGGTGAGCTCTTTGACAAGGTATCCAAAGGAAAGCTCAAGCAGGATGATGCTAGGAAATATTTTCAGCAATTGATCAGTGCTGTTGACTACTGCCATAGCAGAGGTGTGTGCCATCGTGATCTGAAACCAGAAAATCTTCTACTGGATGAAGATGGGAATTTGAAGGTCTCAGATTTCGGTTTAAGTGCCCTTGCCGAAACTAAGCACCAGGATGGGTTACTCCATACCACATGTGGTACCCCTGCCTATGTTGCTCCAGAAGTGATAAACAGAAGGGGTTATGATGGAGCCAAAGCTGACATATGGTCATGTGGGGTGATCTTGTATGTTCTATTAGCAGGTTTTCTTCCATTTAGAGATCCAAATCTGATGGAGATGTACAGGAAGATTGGCAAGGGAGAATTTAAATTTCCAAACTGGTTTGCACCAGATGTGCGCAGACTGCTGTCTAAAATCTTGGATCCAAACCCAAAGACCAGGATATCAATGGCCAAAATTATGGAAAGTTCCTGGTTCAAAAAGGGGTTACAGAAGCCCACCATTACTGAGAACAAAGACGAAGAACTAGCTCCTCTGGATACTGATGGAGTATTTAGTTTTTGTCAGAATGGAGATCCTATTGAACCAGCAAAAGACTCAAAACCTTGTAATCTAAACGCTTTTGACATCATCTCCTATTCCTCAGGTTTTGACTTGTCTGGTTTGTTTGAGGAGACCACTGATCGTAAGAAAGAAGCACGATTTACCTCTGATAAGCCGGCATCTATTATCATCTCCAAGTTGGAAGAAATTTGCAAGCGCCTGCGGCTGAAACTCAAGAAGAAAGATGGAGGTTTATTCAAGTTGGAAGGTTCCAAGGAAGGCAGAAAAGGGCCTTTGGGTATTGATGCTGAGATTTTTGAGATCACCCCAGTTTTCCATCTTGTGGAGTTAAAAAAGTCTAGCGGAGACACATTGGAGTACCAAAATCTTTTGAAACAGGAAGTAAGGCCTGCACTTAAGGACATTGTTTGGAACTGGCAAGGAGAACAGCCACATCAACTGCAACATGGAGTGTTGCAAAGAGAGGAACAACCTTCTTATCCTGCCATATCAGAGATTGTGCCACAACCAACTGCGTAG 1404 0.4224 MEQKGGVLMQRYELGRLLGQGTFAKVYHARNLITGMSVAIKIVDKEKILKVGMIDQIKREISVMRLIRHPHVAELYEVMASKTKIYFVMEYVKGGELFDKVSKGKLKQDDARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEDGNLKVSDFGLSALAETKHQDGLLHTTCGTPAYVAPEVINRRGYDGAKADIWSCGVILYVLLAGFLPFRDPNLMEMYRKIGKGEFKFPNWFAPDVRRLLSKILDPNPKTRISMAKIMESSWFKKGLQKPTITENKDEELAPLDTDGVFSFCQNGDPIEPAKDSKPCNLNAFDIISYSSGFDLSGLFEETTDRKKEARFTSDKPASIIISKLEEICKRLRLKLKKKDGGLFKLEGSKEGRKGPLGIDAEIFEITPVFHLVELKKSSGDTLEYQNLLKQEVRPALKDIVWNWQGEQPHQLQHGVLQREEQPSYPAISEIVPQPTA* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00789 467 CDD CIPK_C 313 428 - -
Phac10g00789 467 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Phac10g00789 467 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g00789 467 CDD STKc_SnRK3 11 265 - -
Phac10g00789 467 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g00789 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Phac10g00789 467 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g00789 467 Gene3D Kinase associated domain 1, KA1 309 433 - -
Phac10g00789 467 FunFam Non-specific serine/threonine protein kinase 2 287 - -
Phac10g00789 467 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 5 428 - -
Phac10g00789 467 FunFam Non-specific serine/threonine protein kinase 307 432 - -
Phac10g00789 467 SUPERFAMILY Protein kinase-like (PK-like) 8 267 IPR011009 -
Phac10g00789 467 Pfam NAF domain 309 368 IPR004041 GO:0007165
Phac10g00789 467 Gene3D Transferase(Phosphotransferase) domain 1 3 308 - -
Phac10g00789 467 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Phac10g00789 467 ProSiteProfiles NAF domain profile. 307 331 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00789 Phac-Chr10 18446804 18449648 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00789 1 438 CBL-interacting serine-threonine protein kinases AT5G58380 65.563 0.0 614
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Phac10g00789 Pkinase 5.4e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00789 K07198 - gmx:100815651 871.692