Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00779 ATGAGTTGCAGAGAAAGGAACAAAGGGGAAAGAGAAGAGAAGAAATATGAGAACAGTTCAGCTGGATTGGAATCAAAATCAGTGAGGCCAAGCATTGGTTCAATAGAAGATGAACAGCTAACAATTGATGAAAGTCTTCTGATTGACCCCAAGCTATTGTTTATTGGGTCAAAAATTGGCGAAGGAGCTCATGGGAGAGTTTATGAAGGAAGGTACAGAGAACGGATTGTTGCTATTAAAGTTCTGCATCGTGGGAGTACTTTAGAAGAAAGAGTTTCACTGGAGAATCGTTTTGCTCGGGAAGTTAATATGATGTCTCGTGTCCACCATGAGAATCTTGTGAAGTTTATTGGAGCTTGTAAGGATCCTCTGATGGTGATTGTTACAGAGATGTTACCTGGGTTGTCACTGCGAAGATATCTGATCACCATACGCCCTAAACCATTGGAGCTTTATGTGGCTATAAAGTTTGCCCTTGATATTGCTTTAGCCATGAATTGGTTACATGCCAATGGCATCATACATAGAGATCTGAAGCCTGATAATCTACTGCTCACAGAAAACCAGGAGTCAGTTAAACTTGCTGATTTTGGTCTGGCAAGAGAAGAATCTGTGACTGAGATGATGACTGCGGAAACTGGAACTTACCGTTGGATGGCACCTGAGGTGCGTTGTGCCATATGA 684 0.4196 MSCRERNKGEREEKKYENSSAGLESKSVRPSIGSIEDEQLTIDESLLIDPKLLFIGSKIGEGAHGRVYEGRYRERIVAIKVLHRGSTLEERVSLENRFAREVNMMSRVHHENLVKFIGACKDPLMVIVTEMLPGLSLRRYLITIRPKPLELYVAIKFALDIALAMNWLHANGIIHRDLKPDNLLLTENQESVKLADFGLAREESVTEMMTAETGTYRWMAPEVRCAI* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00779 227 Pfam Protein kinase domain 57 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g00779 227 MobiDBLite consensus disorder prediction 1 20 - -
Phac10g00779 227 Gene3D Phosphorylase Kinase; domain 1 41 132 - -
Phac10g00779 227 Gene3D Transferase(Phosphotransferase) domain 1 133 225 - -
Phac10g00779 227 ProSitePatterns Protein kinases ATP-binding region signature. 59 80 IPR017441 GO:0005524
Phac10g00779 227 SMART serkin_6 53 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g00779 227 MobiDBLite consensus disorder prediction 1 29 - -
Phac10g00779 227 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Phac10g00779 227 FunFam Kinase suppressor of Ras 1 42 132 - -
Phac10g00779 227 ProSiteProfiles Protein kinase domain profile. 53 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g00779 227 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 48 223 - -
Phac10g00779 227 SUPERFAMILY Protein kinase-like (PK-like) 44 224 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00779 Phac-Chr10 17689003 17696301 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00779 41 227 MAP Kinase Kinase Kinase AT5G01850 68.720 1.57e-99 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Phac10g00779 Pkinase 8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00779 - - gmx:100816708 377.867