Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00738 ATGGAATATTCTTCTTCAGCAGTTTCTGAAATAAAATATGTTGTTTTTCTTTCTCTCTTGATTATTTCAATTTTGAAAGGTGTAGAATCAAAGCAACTGTCAGATAATGTTCCTCAAATAAAGTATGATGTGTTTGTTAACTTCAGGGGCGAGGACATTCGTCACAGTTTTCTCGGTTATCTGACTGAGGCTTTTCATCAACACAAAATATATGCCTTTGTTGATGATAAACTTGGGAAGGGAGATGAAATCTGGCCATCCCTTGTTGGAGCAATTAAAGGATCACTGATTTCCTTGACCATATTTTCAGAAAACTATGCGTCTTCACGTTGGTGTTTGGAGGAACTGGTGCAAATACTTGAGTTCAGGGAGAAATATGGACAAATTGTATTACCTGTTTTCTACCATGTATATCCCAAAGATGTGCGACATCAAAAGAGGAGCTATGAAAAAGCTCTTGCTGAACATGAAAAGAAATATAATTTGACCACAGTGCAAAACTGGAGACATGCATTGAAGAAAGCTGCTAATTTATCAGGAATAAAGTCTTTCGATTACATGACTGAAGTTGAGTTGCTTGGAGAAGTTATCAATATTATTAATCTTGTGCTGATGAGGTTGGGTGAGCATCCACTTAACTTAAAAGGAGTTGTGGGAATTGAAAAACAAGTTCAATATTTAGATTCATTATTGCTTCAGGATTCAACAGATGTCCGTGTTATTGGAATTTGGGGTATGGGTGGTATCGGAAAGACAACAATAGCAGAAGAAATATTTAACAAACTATACTCCAAATATGATGGTCACTGTTTTTTGGCCAATGTAAAGGAAGAAACAAGAGGACATGGGACAATTTCTTTGAAGGAAAAAATGTTTTCTATGCTACTAGCAGAAAATGTGAAAGTGAACACAGCAAATGGATTGTCAAATTATATTAAGAGAAAGATTGGTCGTATGAAGGTTTTAATTGTTTTGGATGATGTGAATGATTCTGATCTACTGGAAAAATTATTTGGAAATCATGCCTGGTTGAGACAAGGTAGTAGAATAATTATAACAACTAGAGACAAGCAAGTGCTTATCGCTAATAAAGTTGATGATATATACCAAGTAGGGGCATTGAAATCAAGTGAGGCAATAGAGCTTTTCAGCTTGTATGCCTTTAACCAAAATAATTTTGATATGGAGTATTATAAGCTATCAAAGCGGGTGGTCAATTATGCAAAAGGCATTCCATTAGTTCTTAAAGTTTTGGGTCATCTTCTTTGTGGAAAAGATAAGGAAGTATGGGAAAGTCAGCTAGACAAACTCAAAAACATGCCAAATACAGATGTTCACAATGCAATGAAACTGAGTTATGATGATCTAGATCGCAAAGAGCAGAAGATTTTTTTAAATCTAGCATGCTTCTTCGTGCAATTGAATTTGAAAGTGGACCGCATAAAAGATTTATTGAAAGATGGAGAAAGAGATAATTCAGTAATAGTTGGGATAGAAAGGTTGAAAGATAAAGCTCTTATAACCATTTCTGAAGACAATGTTATATCTATGCATGATATTATACAAGAAATGGCTTGGGAGATTGTTCGTCATGAATCTATTGAAGACCCTGGAAGTCGTAGTCGATTGAGGGATGTGGATGACATTCATGAAGTATTACAAAATAATAAGATGAGCAAACTACAATTTTTGTATTTTCCAAGTGAAGATGTCTTTGATCTTCTTCCTCAAGGGCTACATTCTTTGCCAGTTGAGTTAAGATATCTTGCATGGACGCATTACCCTCTGAAATCGCTGCCAGAGAATTTTTCTGCTGAAAAGCTTGTTATATTGGACTTGTCAGATAGCCAAGTGGAAAACCTTTGGGATGGAGTGCAGAATTTGATGAATTTAAAAGAAGTCAAACTCTCTGGTTCTAAAAGCTTGAAGGAGCTGCCAGACCTTTCAAAAGCCACAAATCTTGAAGAACTGTATATCAATTCTTGTCCTCAGTTGACCAGTGTGAGCCCCTCTATTTTCTCCCTCAAGAAGCTCGAGAAGTTGGATCTTGGTTTCTGTTCCCTTACCAAGATTATAAGCAGGAACCATTTAAGCTCCCTTAGCTATTTCAACCTTATATTCTGCAACAAGCTAAGGGAATTTTCAGTGACATCAGAGAATTTGGTTATGCTAGATTTGTCATTCACTCCTGTTAATGCATTGCCTTCATCTTTTGGACGTCAAAGCAAGCTTGAAATCCTATTGCTAATAAACAGTGGCATCCAGAACTTGCCTTCAGACTTCAAGAATCTTACAAGACTTCGATATCTGAATGCTTATAATTCCACAGAGCTTCATACTCTAACGGAGCTTCCACCTTCTCTTCAAACTCTAGATATCACAGGATGCACATTATTGAAGACCGTGTGGCTTCCATCAATTTCTGAACAATTCAAGGAAAGCCGGAGAGAAGTTCTCTTTTGGAATTGCTTGAAATTGAACAGACACTCTCTTAAGGCTATTGGGTTAAATGCACATATTAACGTCATGAAATTTGCGTACCATCACTTATCTGCACCAGATGAAAATTATGAAGATTATGATCGTAATTATAGATCATATCAAATAAGGTTTGTGTATCCAGGAAGCAGAATTCCAGAGTGGCTGGAATATAAGACAACAAAGGATTATGTTGTCATTGATCTCTCTTCTACTCCACGCTCCTCTCCAATAGGCTTTATTTTCTGCTTTGTTATTTCTGGCCCTAAGGTGAGGACAATGAAAGGTTATAGCTTCATATTTTATATCACTATCACTAAAGATGAGGATGAAAGTAAAAAAGATTCTATCTACATCTACATGTATAGCCCTGTTATGAGGGTTGCATCAGATCATGTGTGTGTGATTTATGACCAACGATGTTCTCACTACCTGAACAACAGAGCCAAAAACCTGACAAAACTTAAAATCAAGGTTAAAGCAATTGCAGGAAACATGCACCATCAACAGGCAACTGATAAAGGCAAAAACAGAGTCTTGGGCTCCTTCTTTAAAGGCACCGAAGATCAATACAAGGAGGAAACCCTATTGGATTTTCGAACATAA 3084 0.3651 MEYSSSAVSEIKYVVFLSLLIISILKGVESKQLSDNVPQIKYDVFVNFRGEDIRHSFLGYLTEAFHQHKIYAFVDDKLGKGDEIWPSLVGAIKGSLISLTIFSENYASSRWCLEELVQILEFREKYGQIVLPVFYHVYPKDVRHQKRSYEKALAEHEKKYNLTTVQNWRHALKKAANLSGIKSFDYMTEVELLGEVINIINLVLMRLGEHPLNLKGVVGIEKQVQYLDSLLLQDSTDVRVIGIWGMGGIGKTTIAEEIFNKLYSKYDGHCFLANVKEETRGHGTISLKEKMFSMLLAENVKVNTANGLSNYIKRKIGRMKVLIVLDDVNDSDLLEKLFGNHAWLRQGSRIIITTRDKQVLIANKVDDIYQVGALKSSEAIELFSLYAFNQNNFDMEYYKLSKRVVNYAKGIPLVLKVLGHLLCGKDKEVWESQLDKLKNMPNTDVHNAMKLSYDDLDRKEQKIFLNLACFFVQLNLKVDRIKDLLKDGERDNSVIVGIERLKDKALITISEDNVISMHDIIQEMAWEIVRHESIEDPGSRSRLRDVDDIHEVLQNNKMSKLQFLYFPSEDVFDLLPQGLHSLPVELRYLAWTHYPLKSLPENFSAEKLVILDLSDSQVENLWDGVQNLMNLKEVKLSGSKSLKELPDLSKATNLEELYINSCPQLTSVSPSIFSLKKLEKLDLGFCSLTKIISRNHLSSLSYFNLIFCNKLREFSVTSENLVMLDLSFTPVNALPSSFGRQSKLEILLLINSGIQNLPSDFKNLTRLRYLNAYNSTELHTLTELPPSLQTLDITGCTLLKTVWLPSISEQFKESRREVLFWNCLKLNRHSLKAIGLNAHINVMKFAYHHLSAPDENYEDYDRNYRSYQIRFVYPGSRIPEWLEYKTTKDYVVIDLSSTPRSSPIGFIFCFVISGPKVRTMKGYSFIFYITITKDEDESKKDSIYIYMYSPVMRVASDHVCVIYDQRCSHYLNNRAKNLTKLKIKVKAIAGNMHHQQATDKGKNRVLGSFFKGTEDQYKEETLLDFRT* 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00738 1027 Gene3D - 205 368 IPR027417 -
Phac10g00738 1027 Gene3D Ribonuclease Inhibitor 541 712 IPR032675 -
Phac10g00738 1027 ProSiteProfiles TIR domain profile. 40 204 IPR000157 GO:0007165
Phac10g00738 1027 Pfam TIR domain 41 184 IPR000157 GO:0007165
Phac10g00738 1027 SUPERFAMILY L domain-like 517 806 - -
Phac10g00738 1027 Gene3D - 39 204 IPR035897 -
Phac10g00738 1027 PRINTS Disease resistance protein signature 673 689 - -
Phac10g00738 1027 PRINTS Disease resistance protein signature 240 255 - -
Phac10g00738 1027 PRINTS Disease resistance protein signature 408 422 - -
Phac10g00738 1027 PRINTS Disease resistance protein signature 315 329 - -
Phac10g00738 1027 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 42 714 IPR044974 GO:0006952
Phac10g00738 1027 Pfam NB-ARC domain 222 455 IPR002182 GO:0043531
Phac10g00738 1027 SUPERFAMILY Toll/Interleukin receptor TIR domain 38 180 IPR035897 -
Phac10g00738 1027 SMART till_3 41 178 IPR000157 GO:0007165
Phac10g00738 1027 Gene3D - 373 457 IPR042197 -
Phac10g00738 1027 FunFam Disease resistance protein (TIR-NBS-LRR class) 38 206 - -
Phac10g00738 1027 Gene3D Ribonuclease Inhibitor 713 804 IPR032675 -
Phac10g00738 1027 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 210 467 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00738 Phac-Chr10 9622835 9627499 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00738 42 834 WRKY Transcription Factor Family AT4G12020 31.699 2.67e-84 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00738 - - gmx:100796110 1400.19