Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00731 ATGGGACACAACAGTTGTCATGTCAAAGATTTCTACACAGACCCTTTTCAGCCTAACCTCTCTTTTGCATATGGTCATTGGAGGAGGAGCCACAAAGGTGGTGGGGGTGGTGGTTTTATTTGCTTAGCCTTTTTTGTGTTTCTTTTGCAAGCTTTGGCTTCTGCCATTCCGCCTGTTTCAGGGCAGTTGTGGGATGGGGTGGTTGTCACTCAAGCTGATTTTCAAGCCCTGAGGGCTATTAAGAACGAGCTAATTGATTTCAAAGGGGTTCTCAAGAGCTGGAATGATAGTGGTCTAGGTGCCTGTTCAGGGTGGGCAGGAATCAAGTGTGTAAATGGTGAGGTTATTGCTATTCAGCTTCCTTGGAGAGGGTTAGGAGGCAGGATCTCTGAGAAAATTGGCCAGCTTCAGTCTCTTAGGAAGCTCAGTCTTCATGACAATGCTCTTGCTGGTCCAGTTCCTTTGTCACTTGGCCTCCTTCCTAACCTTAGAGGGGTTTATCTGTTTAATAACAAGCTTTCAGGTTCTATCCCTCCTTCCCTTGGCAATTGTCCAATGCTTCAGTCTCTTGATATTAGCAACAATTCCCTCAGTGGTAAAATCCCTCCCAGTTTAGCGAGATCTACTAGGATACTTAGGATCAATTTGAGCTTCAACTCACTTTCTGGATCCATTCCTAGCAGTTTGACTATGTCTCCTTCTCTAACCATTCTTGCCCTCCAACACAACAACCTCTCTGGCTCTATCCCAGATTCTTGGGGTGGAGCTGGAAAGAAGAAAGCTTCCCAGCTTCAAGTTTTGACCCTTGATCACAATCTCATTTCTGGAATCATCCCAGTTTCTCTAGGCAAGCTAGCTTTTCTTGAAAATGTTTCTTTGAGTCATAACCTGATTGTAGGGCCTATTCCAAGTGAACTAGGTGCACTTTCTAGGCTTCAAATTCTTGATCTTTCAAACAATGCCATCAATGGCAGCCTTCCTGCTAGCTTCTCTAACCTCTCTTCTCTAGTTTCATTAAACCTTAATAGCAATCAACTTGAAAACCATATTCCAGATTCTTTGGATAGGTTGCACAACCTTTCTGTTCTTAACCTGAAGAACAATAAGCTTGATGGCCAAATCCCACCAACAATAGGGAACATCTCAAGCATTAGCCAAATTGATTTTTCTGAAAACAGATTAGTTGGAGGAATTCCAGATACCCTTACCAAACTTGCAAATCTCAGTTCATTCAACGTCTCTTACAACAACCTATCTGGTCCTGTCCCATCTCTTCTTTCCAAAAGATTCAATGCTAGCTCTTTTGTTGGAAATCTTGAGCTATGTGGGTACATCAGCTCAAAACCTTGCCCTTCACCCTCTCCTCTTAATCTTCCAGCTCAATCACCACAGGCTCTTTCTAAGCCTCACCACCGCAAACTAAGCACCAAGGACATAATCCTCATAGTGGCAGGTGTTCTTCTGTTGATTCTGTTATTACTCTGCTGCTTTTTGTTGTGTTGTTTGATCAGGAGAAGAACTGCTTCAAGCAGAAAGAGTGGCAAAGCTGCTAAGGCTGCAGCATCTGCTAGAAGTGTTGAGAAAGGTATTTCAGCTGGTGGTGAGGTTGAATCAGGAGGTGAAGCTGGCGGGAAACTAGTTCACTTTGATGGGCCTTTTGTGTTTACTGCTGATGATCTTTTGTGTGCAACTGCGGAGATAATGGGAAAAAGTGCATATGGAACAGCATACAAAGCAACACTGGAAGATGGTAACCAAGTTGCTGTGAAGAGGTTGAGGGAAAAGACTACTAAAGGGCAGAAGGAGTTTGAAACTGAGGTTGCTGCACTTGGCAAAATCAGACACCCAAATCTCTTAGCACTTAGAGCTTACTATTTAGGACCAAAAGGAGAGAAGCTTCTTGTCTTTGATTACATGACAAAAGGAAGCCTAGCATCATTCCTTCACGCTCGTGGGCCTGAAATTGTTATTGAATGGCCAACAAGGATGAAGATAGTTATTGGAGTCACTAGGGGCTTGAGCTACCTACATAGCCAAGAGAACATTGTACATGGGAACCTCACATCAAGCAACATACTATTGGATGAGCAAACAGAAGCCCACATAACAGATTTTGGTCTCTCAAGGCTGATGACAACTTCTGCCAACACCAACATCATTGCCACTGCAGGAAGCCTTGGATACAACGCACCAGAGCTTTCAAAGACCAAGAAGCCTAACACAAAGACTGATGTGTACAGTCTTGGTGTCATCATGTTGGAACTCCTAACTGGAAAGCCACCTGGAGAGCCAACCAATGGCATGGACTTGCCCCAATGGGTTGCTTCCATAGTGAAGGAAGAGTGGACTAATGAAGTGTTTGATTTGGAACTCATGAGGGATGCACCAGCCATAGGGGATGAATTGCTTAACACGTTGAAGTTAGCACTGCATTGTGTGGATCCATCTCCTTCTGCCAGGCCTGAAGTACACCAAGTTCTGCAGCAATTGGAGGAGATCAAACCAGAGTTGGCTGCAGGGGATGATGAAGCTACCAAGGTCCAAACAACTGAGTAA 2556 0.4421 MGHNSCHVKDFYTDPFQPNLSFAYGHWRRSHKGGGGGGFICLAFFVFLLQALASAIPPVSGQLWDGVVVTQADFQALRAIKNELIDFKGVLKSWNDSGLGACSGWAGIKCVNGEVIAIQLPWRGLGGRISEKIGQLQSLRKLSLHDNALAGPVPLSLGLLPNLRGVYLFNNKLSGSIPPSLGNCPMLQSLDISNNSLSGKIPPSLARSTRILRINLSFNSLSGSIPSSLTMSPSLTILALQHNNLSGSIPDSWGGAGKKKASQLQVLTLDHNLISGIIPVSLGKLAFLENVSLSHNLIVGPIPSELGALSRLQILDLSNNAINGSLPASFSNLSSLVSLNLNSNQLENHIPDSLDRLHNLSVLNLKNNKLDGQIPPTIGNISSISQIDFSENRLVGGIPDTLTKLANLSSFNVSYNNLSGPVPSLLSKRFNASSFVGNLELCGYISSKPCPSPSPLNLPAQSPQALSKPHHRKLSTKDIILIVAGVLLLILLLLCCFLLCCLIRRRTASSRKSGKAAKAAASARSVEKGISAGGEVESGGEAGGKLVHFDGPFVFTADDLLCATAEIMGKSAYGTAYKATLEDGNQVAVKRLREKTTKGQKEFETEVAALGKIRHPNLLALRAYYLGPKGEKLLVFDYMTKGSLASFLHARGPEIVIEWPTRMKIVIGVTRGLSYLHSQENIVHGNLTSSNILLDEQTEAHITDFGLSRLMTTSANTNIIATAGSLGYNAPELSKTKKPNTKTDVYSLGVIMLELLTGKPPGEPTNGMDLPQWVASIVKEEWTNEVFDLELMRDAPAIGDELLNTLKLALHCVDPSPSARPEVHQVLQQLEEIKPELAAGDDEATKVQTTE* 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00731 851 Pfam Protein tyrosine and serine/threonine kinase 566 830 IPR001245 GO:0004672|GO:0006468
Phac10g00731 851 Gene3D Phosphorylase Kinase; domain 1 568 639 - -
Phac10g00731 851 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 262 833 - -
Phac10g00731 851 CDD STKc_IRAK 568 833 - -
Phac10g00731 851 Pfam Leucine Rich Repeat 187 205 IPR001611 GO:0005515
Phac10g00731 851 SMART LRR_typ_2 160 184 IPR003591 -
Phac10g00731 851 SMART LRR_typ_2 309 332 IPR003591 -
Phac10g00731 851 SMART LRR_typ_2 333 356 IPR003591 -
Phac10g00731 851 SMART LRR_typ_2 405 428 IPR003591 -
Phac10g00731 851 SMART LRR_typ_2 357 381 IPR003591 -
Phac10g00731 851 SMART LRR_typ_2 136 159 IPR003591 -
Phac10g00731 851 Gene3D Ribonuclease Inhibitor 69 258 IPR032675 -
Phac10g00731 851 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 256 454 - -
Phac10g00731 851 PRINTS Leucine-rich repeat signature 187 200 - -
Phac10g00731 851 PRINTS Leucine-rich repeat signature 309 322 - -
Phac10g00731 851 SUPERFAMILY Protein kinase-like (PK-like) 566 834 IPR011009 -
Phac10g00731 851 FunFam Pollen receptor-like kinase 1 639 844 - -
Phac10g00731 851 Pfam Leucine rich repeat 310 370 IPR001611 GO:0005515
Phac10g00731 851 FunFam Leucine-rich repeat receptor-like protein kinase 548 638 - -
Phac10g00731 851 Gene3D Ribonuclease Inhibitor 259 348 IPR032675 -
Phac10g00731 851 ProSiteProfiles Protein kinase domain profile. 562 837 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g00731 851 Pfam Leucine rich repeat N-terminal domain 72 110 IPR013210 -
Phac10g00731 851 SUPERFAMILY L domain-like 109 453 - -
Phac10g00731 851 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 70 251 - -
Phac10g00731 851 Gene3D Ribonuclease Inhibitor 349 444 IPR032675 -
Phac10g00731 851 Gene3D Transferase(Phosphotransferase) domain 1 640 849 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00731 Phac-Chr10 9495739 9499591 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00731 64 835 Receptor kinase-like Gene Family AT3G51740 70.308 0.0 1047
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Phac10g00731 PK_Tyr_Ser-Thr 3.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00731 - - gmx:100799290 1385.16