Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00715 ATGGGAGGGTGTTGCAGTTGCTCTGGTTCATATGTAGACAAGGTACATGATGTGGAATGTTCATGTAAGCATTACCATGATGATGGTGCATGTAAACATGGTGGGGCCGGGGTCATGTTAAGAGGGTCCTCTGAGTTTGTATCCATGTTCAGCCAAAAGGGTTCAAAAGAAGTTAATCAAGATGCATTCACTGTTTGGAAGAACTTCACTGGAAAAAAGGACACGATCTTTTGTGGCGTGTTTGACGGTCATGGTCCTCTAGGACAGAAGTTTGCACGGTCTATACGTGAAAAACTACCCTCAAAACTCTCAGCATCAATTAAACAGTCACAACAAAAGGTTGTCGGACACAATGATACTAATGCTACAGATGGAATTAATCATAGTAATGTCTACGTTGAGGATGACCAAAACATGTCCTTTTCTTCATGGGAGGGAAGCTTTACGAGGTGCTTCAATGAAATGGATGAAGACCTTATTAAGAACATAGACTCTAAAGGATTTAGTGGCGGTAGCACTGCTGTAACGCTTATCAAACAGGGTGACCAATTAATAATTGGCAATTTGGGGGATTCTCGTGCAGTTCTTTGCAGAAGAGCACATGACAACCATCTTGTTCCTGTTCAACTTACTGTTGACTTGACCCCAAATATTCCAAGTGAAGCTTTAAGAATCATCAAGTGCGGTGGTAGAATTTTTTCTTTAAAAGAAGAACCAAGTGTAAAGAGAATATGGAGGCCACAAGGGAGTCGCCCTGGACTGGCTATGGCAAGAGCCTTCGGAAATTTTTGCCTAAAAGATTATGGTCTCATCTCAGTTCCCGATGTATCATACAGAAAACTCACCCAGCAGGATGAGTTTGTGGTTTTGGCTTCTGATGGGGTATGGGATGTGCTAACAAACAGTGAAGTAATAAACATAGTTGCTTCAGCACCAAAAAGGTCCATGGCAGCTAAATTGTTAGTGAACCATGCAGTTAAAGCTTGGAGACGCAAGTATGGTTCCAAGGTTGATGATTGTACAGCTATATGCTTGTTCTTGAAGGATCAGACTGTTTCAACCCAATCCTGA 1071 0.4192 MGGCCSCSGSYVDKVHDVECSCKHYHDDGACKHGGAGVMLRGSSEFVSMFSQKGSKEVNQDAFTVWKNFTGKKDTIFCGVFDGHGPLGQKFARSIREKLPSKLSASIKQSQQKVVGHNDTNATDGINHSNVYVEDDQNMSFSSWEGSFTRCFNEMDEDLIKNIDSKGFSGGSTAVTLIKQGDQLIIGNLGDSRAVLCRRAHDNHLVPVQLTVDLTPNIPSEALRIIKCGGRIFSLKEEPSVKRIWRPQGSRPGLAMARAFGNFCLKDYGLISVPDVSYRKLTQQDEFVVLASDGVWDVLTNSEVINIVASAPKRSMAAKLLVNHAVKAWRRKYGSKVDDCTAICLFLKDQTVSTQS* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00715 356 SMART PP2C_4 36 345 IPR001932 -
Phac10g00715 356 ProSiteProfiles Zinc finger SWIM-type profile. 11 42 IPR007527 GO:0008270
Phac10g00715 356 SMART PP2C_SIG_2 50 347 IPR001932 -
Phac10g00715 356 Gene3D - 42 350 IPR036457 -
Phac10g00715 356 Pfam Protein phosphatase 2C 104 327 IPR001932 -
Phac10g00715 356 CDD PP2Cc 46 347 IPR001932 -
Phac10g00715 356 PANTHER PROTEIN PHOSPHATASE 46 345 IPR015655 GO:0004722|GO:0006470
Phac10g00715 356 ProSiteProfiles PPM-type phosphatase domain profile. 46 347 IPR001932 -
Phac10g00715 356 SUPERFAMILY PP2C-like 46 349 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00715 Phac-Chr10 8768684 8771285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00715 42 349 PP2C-type Phosphatase Gene Family AT1G16220 47.678 1.37e-109 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00715 - - vra:106755106 602.438