Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00652 ATGGAACATAATGCCCCACACGTTCCCCCCTCTGAAACTTCCCACTCTCGCCGCCACAGGGTTCGTCCCAAAAGCAGCGTCCAATTTGATGATAACATCATCATACACGATGACAATGCCAACCTCATCTATGTTAATGATCCCGTCAAGACTAATGAAAAGTATGAGTTTTCTGGGAATGCCATCCGAACCAGCAGATACACTCTTCTCACCTTCTTGCCCAAGAATCTGTTCATTCAGTTTCACCGGGTTGCTTATCTCTATTTCCTTGCCATTGCTGCCCTGAATCAGCTTCCTCCGCTAGCTGTTTTCGGCCGAACCGTCTCCCTTTTCCCCTTATTGTTTGTGCTTTGCGTCACTGCTATCAAGGATGCCTACGAGGATTGGCGCAGGCACAGGTCGGATTGCCATGAAAACAATCGTGAGTGTCTGGTTCTTCAATCGGCTCAGTTCCGTTCCAAGAGATGGAAAAATGTACAGGCCGGTGATGTGGTTAAAATCTTTGCCGATGGGATGATTCCTGCTGACGTGGTCTTGTTGGGAACAAGTGATCCGAGTGGGGTTGCCTATATTCAGACAATGAATTTGGATGGTGAATCGAATTTGAAGACACGGTTTGCCAAGCAAGAAACAGCTTCAGTGGTTTTGCCAGATGCTTGTGCTGTCGATGGAGTTATTAGATGTGAGCCACCTAATCGGAATATCTATGAGTTCACTGCCAACATGGAGTTCAATGGCCATAAGATTCCCCTTAACCAGTCAAACATTGTACTGCGTGGTTGCATGCTGAAAAACACGAATTGGATAATTGGTGTTGTGGTCTATGCAGGACAGCAAACAAAAGCAATGATGAACAGCGCAGCTTCCCCTTCCAAGAGAAGCAAACTAGAAAGTTACATGAACAGAGAAACTTTGTGGTTGTCAGTTTTTCTTTTTATCATGTGCGCAGTTGTTGCCCTTGGGATGAATCTCTGGCTGATACGCCATGAGGATCAGCTTGATACCTTGCCTTACTACAGAAAAAAATTCTTCGACAATGGGCCAAATGAGGGAAGGAAATACAGGTACTATGGGATAACAATGGAAACATTCTTCTCCTTTTTGAGCTCTATTATTGTGTTTCAGATAATGATACCAATATCGCTATATATCACAATGGAGTTAGTTCGACTGGGTCAGTCATACTTCATGATAGAGGACAAGGATATGTATGATACTAAATCTGGATCAAGGTTCCAGTGTAGATCATTAAATATAAATGAAGATTTGGGTCAAATACGCTACGTGTTTTCTGACAAGACAGGAACTCTAACAGAAAACAAAATGGAGTTTCAGAGAGCCAGTATACATGGAAAGAACTACGGGGGCTCCTTGCTTACAGATGATAAAAGTACAGAAGCGGCAGCAGCAAATATTGGTAAACGAAAATGGAACCTCAAATCTGAAATTGCTGTTGATTCTGAACTAATGGCATTGTTGCAGAAAGACTCAAATTTAGATGAAAGAATTGCTGCTCATGAGTTTTTCCTCACATTGGCTACTTGTAATACTGTGATCCCCATTCTCAGTAGTAGTAAAGTTTCCAGTTGTGAAAAAGATGAATCAAATCAAGACATAGAAGGTATTGATTACCAGGGAGAGTCTCCTGATGAACAAGCTCTAGTTTCAGCTGCATCTGCATATGGATATACTCTATTTGAGCGAACATCTGGAAACGTTGTTATTGATGTCAATGGTGAGAAACTCAGGTTGGATGTATTGGGCCTGCATGAGTTTGATAGTGTGCGAAAGAGGATGTCTGTTATTATCCGGTTTCCTGATAATGCTGTTAAGGTGTTGGTTAAAGGCGCTGACACTTCTATGTTTAGCATTTTAGCACCTGACTCTAAAGGAAACAATCGCATACAGCATGAAACACAGAGTCATTTAAATGAATATTCTATGCAAGGTTTACGAACTCTTGTAGTAGGCTCCAGGGATCTTTCAGATGCTGAATTTGAGGAGTGGCAAAGCATGTATGAAGATGCAAGCACTTCATTGACTGATCGAGCTGCAAAACTACGTCAAACAGCGGCTCTAATAGAATGCAACCTAAAGCTACTTGGAGCAACTGGAATTGAGGACAAGCTACAGGAGGGTGTGCCAGAAGCCATTGAGTGCATTCGGGAAGCTGGAATCAAGGTCTGGGTTCTTACTGGTGATAAGCAAGAGACTGCAATTTCAATTGGTCTTTCTTGTAAACTTCTGAATGGAGATATGCAGCAGATAATTATAAATGGCACTTCAGAGGTTGAGTGCAGAAAGCTATTGACTGATGCTATAGCTAAGTATGGGTTGAAATCTTCAAGTAGAGAACATCAGAATCTGAAGCGCAAAACTGATTCTAGACATGATTGCCCTGATATTCACAATGACACAAAATCATTGGGCTTGCCCAAGTCAAATGCAGGAAAGGAAGAAGGAACTACTTCTCAATTGGCACTCATAATTGATGGAACCAGTTTAGTTTATATTTTGGAGAAGGATCTGCAGTCAGAGCTTTTCAACCTTGCAACTTCCTGTAGGGTTGTGCTATGCTGCCGTGTTGCACCCTTGCAGAAAGCAGGAATTGTTGATCTGATAAAAAGCCGCACAGATGATCTGACATTAGCTATTGGTGATGGGGCAAATGATGTGTCAATGATCCAAATGGCAGATGTTGGTGTTGGAATATGTGGGCAGGAAGGTCGCCAAGCTGTTATGGCATCAGATTTTGCTATGGCACAATTCCAGTTCTTGAAAAGATTGCTTCTGGTTCACGGGCACTGGAATTATCAGCGTGTTGGTTATCTAGTTCTGTACAACTTTTACCGCAATGCTGTCTTTGTGTTGATGCTATTCTGGTATATATTATGCACTGCTTTTTCTACAACTTCTGCATTGACAGAGTGGAGCAGTGTATTTTATTCTGTGATATACACATCTATCCCCACTATCATTATTGGTGTGTTGGACAAAGACTTGAGTCATAGTACACTCTTGCAGTATCCAAAATTATATGGTACAGGTCACAGGCATGAGGCTTACAATTTGCAATTATTTTGGATTACAATGATTGACACACTATGGCAGAGTCTTGTTCTCTTCTACATTCCCCTATTCATCTATAAGGACAGCACAATTGATATATGGAGCATGGGCAGTTTATGGACAATTTCAGTTGTTATCCTTGTAAACGTACACCTGGCTATGGACATTAACCAGTGGGCACTGGTTAGTCATGTTGCTGTATGGGGATCAATAATCATTACATATGGCTGCATGGTGATATTGGATTCTATACCTGCCTTTCCCAATTACGGGACTATTTATCATTTGGCAAGTTCCCCTACATATTGGATGACAATTTTGCTTATAATAGTCGTGGCATTGCTACCTCGCTTTTCTTGCAAAGCTTTTTATCATGTCTTTTGTCCTTCCGATATCCAGATAGCTAGAGAAGCTGAGACAATGAGAAAACAGCATGATGATTTGCCATCAAAGTGTCTATTTTCTAAATAA 3540 0.4153 MEHNAPHVPPSETSHSRRHRVRPKSSVQFDDNIIIHDDNANLIYVNDPVKTNEKYEFSGNAIRTSRYTLLTFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDAYEDWRRHRSDCHENNRECLVLQSAQFRSKRWKNVQAGDVVKIFADGMIPADVVLLGTSDPSGVAYIQTMNLDGESNLKTRFAKQETASVVLPDACAVDGVIRCEPPNRNIYEFTANMEFNGHKIPLNQSNIVLRGCMLKNTNWIIGVVVYAGQQTKAMMNSAASPSKRSKLESYMNRETLWLSVFLFIMCAVVALGMNLWLIRHEDQLDTLPYYRKKFFDNGPNEGRKYRYYGITMETFFSFLSSIIVFQIMIPISLYITMELVRLGQSYFMIEDKDMYDTKSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFQRASIHGKNYGGSLLTDDKSTEAAAANIGKRKWNLKSEIAVDSELMALLQKDSNLDERIAAHEFFLTLATCNTVIPILSSSKVSSCEKDESNQDIEGIDYQGESPDEQALVSAASAYGYTLFERTSGNVVIDVNGEKLRLDVLGLHEFDSVRKRMSVIIRFPDNAVKVLVKGADTSMFSILAPDSKGNNRIQHETQSHLNEYSMQGLRTLVVGSRDLSDAEFEEWQSMYEDASTSLTDRAAKLRQTAALIECNLKLLGATGIEDKLQEGVPEAIECIREAGIKVWVLTGDKQETAISIGLSCKLLNGDMQQIIINGTSEVECRKLLTDAIAKYGLKSSSREHQNLKRKTDSRHDCPDIHNDTKSLGLPKSNAGKEEGTTSQLALIIDGTSLVYILEKDLQSELFNLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDLTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMAQFQFLKRLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTEWSSVFYSVIYTSIPTIIIGVLDKDLSHSTLLQYPKLYGTGHRHEAYNLQLFWITMIDTLWQSLVLFYIPLFIYKDSTIDIWSMGSLWTISVVILVNVHLAMDINQWALVSHVAVWGSIIITYGCMVILDSIPAFPNYGTIYHLASSPTYWMTILLIIVVALLPRFSCKAFYHVFCPSDIQIAREAETMRKQHDDLPSKCLFSK* 1180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00652 1179 NCBIfam HAD-IC family P-type ATPase 362 456 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac10g00652 1179 NCBIfam HAD-IC family P-type ATPase 855 971 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac10g00652 1179 SUPERFAMILY Calcium ATPase, transmembrane domain M 57 1152 IPR023298 -
Phac10g00652 1179 Pfam Phospholipid-translocating P-type ATPase C-terminal 913 1153 IPR032630 -
Phac10g00652 1179 SUPERFAMILY HAD-like 417 930 IPR036412 -
Phac10g00652 1179 ProSitePatterns E1-E2 ATPases phosphorylation site. 432 438 IPR018303 -
Phac10g00652 1179 SUPERFAMILY Calcium ATPase, transduction domain A 140 283 IPR008250 -
Phac10g00652 1179 Gene3D - 544 677 IPR023299 GO:0000166
Phac10g00652 1179 Pfam Phospholipid-translocating ATPase N-terminal 43 108 IPR032631 -
Phac10g00652 1179 PRINTS P-type cation-transporting ATPase superfamily signature 430 444 - -
Phac10g00652 1179 PRINTS P-type cation-transporting ATPase superfamily signature 885 904 - -
Phac10g00652 1179 MobiDBLite consensus disorder prediction 785 819 - -
Phac10g00652 1179 Gene3D - 117 287 - -
Phac10g00652 1179 FunFam Phospholipid-transporting ATPase 543 678 - -
Phac10g00652 1179 CDD P-type_ATPase_APLT_Dnf-like 59 1045 - -
Phac10g00652 1179 SFLD p-type atpase 414 936 IPR044492 -
Phac10g00652 1179 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 436 714 IPR023299 GO:0000166
Phac10g00652 1179 FunFam Phospholipid-transporting ATPase 115 285 - -
Phac10g00652 1179 MobiDBLite consensus disorder prediction 785 804 - -
Phac10g00652 1179 Pfam E1-E2 ATPase 140 388 - -
Phac10g00652 1179 SFLD C1.7: P-type atpase like 414 936 - -
Phac10g00652 1179 Pfam Cation transport ATPase (P-type) 535 622 - -
Phac10g00652 1179 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 30 1165 - -
Phac10g00652 1179 MobiDBLite consensus disorder prediction 1 16 - -
Phac10g00652 1179 NCBIfam phospholipid-translocating P-type ATPase 57 1160 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Phac10g00652 1179 Gene3D - 697 925 IPR023214 -
Phac10g00652 1179 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00652 Phac-Chr10 8065393 8073674 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00652 35 1172 Primary Pumps ATPases AT5G04930 56.151 0.0 1311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00652 K14802 - gmx:100788740 2064.66