Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00645 ATGTACCAGGGCCCTCGAGTTTCCAGCGTTTTCTGGCCTTACGCTTGGCTTCAGAGCAATAACTTCGGGAATGGAAACGGCAATGGTAGATCCATTTTCAACGATAGCAGGGTTGTTGTGGTGGATGATTTGGGCTATTTGGTTTCTTCTGATAACTTCACTTTCAAAACAAGTGATTACGGAATGATACTCCTACGCAGATTGACCCTGGATCACGACGGCAATGTTCGTTTGTATAGCATGAAAGACGGAGAAAACAAGTGGTCTGTGTCAGGACTATTTCGGCGACAACCTTGTTTTATTCATGGAATTTGTGGACCCAACAGTATTTGCAGCTATGAGCCAAGAATAGGAAGAAAGTGTTCCTGTAGTCCAGGATATAGATGGTTTGATAGTGAAGACTGGTCTCAAGGTTGCATACCCAGTTTCCAACTTTGGTGCAACAGTAACACTGAGCAAAAGTCTCGCTTTCTAAGCTTACCTGGAGTTGATTTTTACGGATATGACTATGGTCTCTTTGAGAATCACACGTACCAACAATGCGTGAGTCTGTGCTCGCGGTTGTGCGAATGCAAAGGGTTTCAACACAGCACTTCGAGGAGTGTTAATGGTCAGTGCTATGTCAAGACACAGTTGTTAAATGGTCATCGTTCACCGAGTTTCACCAACTCATTTTTCCTGAGACTGCCTTATCACCTCCATGACTATGATGAGAGCCCTAACAATAATGGTTTGGTTTGTGGAAGAAATGGTGGAGTAGTTAAAGTACTTGAGAGACCTTACGTAGAAGAAAAAGAAAATGAGTTGGTGAAGTTCATCTTATGGTTTGCGATTGCCTTCGGAGGTATTGAGGTTGTGTGCATCTTTTTGGTGTGGTGTTTATTGTTTAGGAAAAACGGGATGTTACCTAGAGAAGGTTATGTTCTTGCAGCTGCAACGGGGTTTAGGAAATTCACTTACTCTGAACTGAAACATGCAACTAAAGGTTTCAGTGAAGAGATTGGAAGGGGGGGTGGAGGTACCGTGTATAAAGGTTTCTTGTCTGATGCTCGAGTTGTGGCAATAAAAAGACTACATGAAGTAGCAAACCAAGGAGAGACTGAGTTTCTGGCAGAAGTAAGCATCATTGGAAGGCTTAACCACATGAATTTGATTGGCATGTTGGGGTATTGTGCAGAGGGAAAGCATAGGTTGTTGGTTTATGAGTACATGGAAAATGGTTCTTTGGCTCAGAATCTCTCGTCAAATTCAAATGAGCTTGACTGGAGTAAAAGGTATAACATTGCTGTGGGAACAGCAAGGGGTCTGGCCTACTTGCATGAAGAATGCTTGGAGTGGATTTTGCATTGTGACATCAAGCCTCAAAACATACTTCTTGACTCTGATTATAAACCAAAAGTAGGGGATTTTGGGTTGTCTAAGCTACTTAACCGGAACAATCTTAACAATTCAAGCTTCTCAAGGATAAGAGGAACAAGAGGTTACATGGCACCTGAATGGGTTTTCAACTTGCCAATCACTTCCAAGGTTGATGTGTACAGCTATGGCATTGTTCTCTTGGAGATGATCACTGGAAGGAGCCCAACAACAGGTGTCCAATTCACAGAGTCAGAATCAGAGTCAGGTCATCATGAGAGATTGGTGACATGGGTGAGGGAGAAAAAGAGGAAAGGAGCAGAAGTGGGACCATCTTGGGTGGATGAGATCGTTGACCCTGCTTTAGGATCAAACTATGTCATGGATGAGATGGAGATATTGGCAACTTTGGCTTTGGAATGTGTAAAGGAAGACAGAGAGGGGAGACCTAACATGAGTCATGTTGCTGAGAGGCTCCAAATTCATGAACATGATCTTAATGGCCTGAACAAAGATTAG 1875 0.4304 MYQGPRVSSVFWPYAWLQSNNFGNGNGNGRSIFNDSRVVVVDDLGYLVSSDNFTFKTSDYGMILLRRLTLDHDGNVRLYSMKDGENKWSVSGLFRRQPCFIHGICGPNSICSYEPRIGRKCSCSPGYRWFDSEDWSQGCIPSFQLWCNSNTEQKSRFLSLPGVDFYGYDYGLFENHTYQQCVSLCSRLCECKGFQHSTSRSVNGQCYVKTQLLNGHRSPSFTNSFFLRLPYHLHDYDESPNNNGLVCGRNGGVVKVLERPYVEEKENELVKFILWFAIAFGGIEVVCIFLVWCLLFRKNGMLPREGYVLAAATGFRKFTYSELKHATKGFSEEIGRGGGGTVYKGFLSDARVVAIKRLHEVANQGETEFLAEVSIIGRLNHMNLIGMLGYCAEGKHRLLVYEYMENGSLAQNLSSNSNELDWSKRYNIAVGTARGLAYLHEECLEWILHCDIKPQNILLDSDYKPKVGDFGLSKLLNRNNLNNSSFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVLLEMITGRSPTTGVQFTESESESGHHERLVTWVREKKRKGAEVGPSWVDEIVDPALGSNYVMDEMEILATLALECVKEDREGRPNMSHVAERLQIHEHDLNGLNKD* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00645 624 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Phac10g00645 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Phac10g00645 624 Pfam S-locus glycoprotein domain 52 128 IPR000858 GO:0048544
Phac10g00645 624 Gene3D Hepatocyte Growth Factor 158 225 - -
Phac10g00645 624 ProSiteProfiles Protein kinase domain profile. 328 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g00645 624 SMART serkin_6 328 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g00645 624 SUPERFAMILY Protein kinase-like (PK-like) 312 616 IPR011009 -
Phac10g00645 624 ProSiteProfiles PAN/Apple domain profile. 147 230 IPR003609 -
Phac10g00645 624 Gene3D Phosphorylase Kinase; domain 1 303 403 - -
Phac10g00645 624 SMART ntp_6 152 229 IPR003609 -
Phac10g00645 624 PANTHER OS07G0415500 PROTEIN 20 612 - -
Phac10g00645 624 Gene3D Transferase(Phosphotransferase) domain 1 404 621 - -
Phac10g00645 624 CDD STKc_IRAK 334 612 - -
Phac10g00645 624 FunFam S-receptor-like serine/threonine-protein kinase 298 403 - -
Phac10g00645 624 Pfam Protein kinase domain 331 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g00645 624 FunFam Serine/threonine-protein kinase 404 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00645 Phac-Chr10 8029356 8032064 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00645 318 622 Trihelix Transcription Factor Family AT5G38560 43.831 3.73e-73 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Phac10g00645 Pkinase 1.5e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00645 - - vun:114167186 1078.54