Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00642 ATGCAAATGGCATCTTCAACAACATTGTGTTTGGGTGTTCTGTTACCTCTGATATTGTTCCATAAGTTGCATGCTTCAACTTCCTTGTCTCTCTCCGTAGAGAAGTTCAAAGAAGATGTGATAGTGTCATCACCCAAACCAACATTCACAGCAGGCTTTTACGCCGTCGGACAAAACGCTTTCTGCTTCGCAATATGGTACACCAACTCACCCAACACCCTCGTTTGGATCGCCAACCGGGACCACCCCGTTAACGGGAAACGCTCCACCCTCTCCCTTCTCAAATCCGGCAACCTCGTTCTCACCGACGCCGCCCAGTTCCAAGTCTGGTCCACCAACACCGCCGCCACATCCAAACAAGTCCAGTTACGTTTGTACGACAACGGCAACCTCGTACTCCTCGAAAGCCGGAACATTTCCTCCGACGTTGTGATATGGCAGAGCTTCGATTTCCCAACCGACACGCTTCTTCCTGGTCAAGCTCTCACGAAGAGCACCAGCCTGGTTTCTTCGAGAAGCGGGAGCAACCACTCCTCCGGTTTCTACAAGCTCTTCTTCGACTCCGAGAATGTTCTTCGAATCATGTACCAGGGTCCTCAAGTTTCCAGCGTTTACTGGCCTGACCCTTGGCTTCAGAACAACAACTTCGGAAACGGTGGCACGGGAAATGGTAGATCCACTTACAACGATAGCAGGGTCGCGGTGCTTGATGATTTCGGCTACTTGGTTTCTTCCGATAACTTCACTTTCAGAAGCATTGACTACGGGGCGGTGCTGCAACGGAGGTTGACCCTCGATCACGACGGTGGTGCGAGGGTGTACAGCAAGAACGATGGGGAAGAGAATTGGACAATGTCAGGGGAATTTCGCTCACATCCTTGCTACGTTCATGGGATTTGTGGGGCTAACAGTTATTGCAGATACGACCCTCCCAGTGGTCGAAAGTGTTCGTGCCTTCCAGGTCATTCGTGGGTTGATAGTGAAGACTGGTCACAAGGTTGCAAACCAACTTTCCAACATTTGTGCGGCAAAAAGGACAGCACCGAGTATGAGTCTCGCTTCCTGCACATACCTGATGTTGATTTCTACGGATACGACCTTGGCTACTTTGGAAATTACACCTACCAACAGTGTGAGAGTCTCTGCTCGCAGTTGTGCGAATGCAAAGGGTTTCAACACAGCTTTTCAGACGAAAATGCTTTCTTTCAGTGCTACCCAAAGACGCATTTGCGTAATGGGAATAGTCAACCAGGTTTCAAGGGATCATTCTTCCTCAGACTTCCTTTATCGTCTCGTGATGAGTACGAGAACACCATCCAAAATAATGGCTTGGTTTGTGGAGGAGATAGTGAGGGCGCAGAGCTGCCTGACAGATTGTATGTCCAAGCGGGAGAAAATGGATCGGTGAAGTTCATGCTGTGGTTTGCAAGCGCTTTGGGGGGAGTTGAGCTGCTGTGCATCTTTCTGGTGTGGTGTTTCTTGTTTAGGAATAATAGAACGTTACCCTCAGGTGCTGAAGGACAAGGGTATGTTCTTGCAGCAGCTGCGGGGTTCAGGAAATTCAGTTACTCTGAACTGAAGCAAGCCACCAAAGGTTTCAGCGAAGAGATTGGAAGGGGTGGTGGTGGTACAGTGTATAAGGGTGTCTTGACAGATAATCAAGTGGTGGCAATAAAGCGTCTGCATGAAGTAGCAAACCAAGGAGAAAGCGAGTTTCTGGCTGAGATAAGCATCATTGGTAGGCTTAACCACATGAACTTAATATCCATGTTGGGGTATTGTGCAGAAGGAAAGCATAGGTTGTTGGTTTATGAGTACATGGAGAATGGTTCTTTAGCTCACAACCTTTCATCAGCTTCAAATGGACTTGACTGGAGCAAAAGGTATAACATTGCTGTGGGAACAGCAAGGGGTCTGGCCTACTTGCATGAAGAATGCTTGGAGTGGATTTTGCATTGTGACATCAAGCCTCAAAACATACTTCTTGACTCTGATTATAAACCAAAAGTAGGAGATTTTGGGTTGTCTAAGCTACTTAACCGGAACAATCTTAACAATTCAAGCTTCTCAAGGATAAGAGGAACAAGAGGTTACATGGCACCTGAATGGGTTTTCAACTTGCCAATCACTTCCAAGGTTGATGTGTACAGCTATGGCATTGTTCTCCTGGAGATGATCACTGGAAGGAGCCCAACAACAGGTGTCCAACTCACAGAGTTAGAAGCAGAGTCACCTCATCATGAGAGGTTGGTGACATGGGTGAGGGAGAAAAGGATGAAAGGATCAGAAGTTGGATCATCTTGGGTGGATCAAATCGTTGACCCTGCTTTGGGATCAAACTATGACATGAATGAAATGGAGATATTGGCAACAGTGGCTTTGGAATGTGTAGAGGAAGAGAAAAATGCTAGGCCCAGCATGAGTCGAGTAGCAGAGAAGCTGCAGGGTCATCACACGATTGTTGATGCTTTGAACAAAGAATAG 2484 0.4742 MQMASSTTLCLGVLLPLILFHKLHASTSLSLSVEKFKEDVIVSSPKPTFTAGFYAVGQNAFCFAIWYTNSPNTLVWIANRDHPVNGKRSTLSLLKSGNLVLTDAAQFQVWSTNTAATSKQVQLRLYDNGNLVLLESRNISSDVVIWQSFDFPTDTLLPGQALTKSTSLVSSRSGSNHSSGFYKLFFDSENVLRIMYQGPQVSSVYWPDPWLQNNNFGNGGTGNGRSTYNDSRVAVLDDFGYLVSSDNFTFRSIDYGAVLQRRLTLDHDGGARVYSKNDGEENWTMSGEFRSHPCYVHGICGANSYCRYDPPSGRKCSCLPGHSWVDSEDWSQGCKPTFQHLCGKKDSTEYESRFLHIPDVDFYGYDLGYFGNYTYQQCESLCSQLCECKGFQHSFSDENAFFQCYPKTHLRNGNSQPGFKGSFFLRLPLSSRDEYENTIQNNGLVCGGDSEGAELPDRLYVQAGENGSVKFMLWFASALGGVELLCIFLVWCFLFRNNRTLPSGAEGQGYVLAAAAGFRKFSYSELKQATKGFSEEIGRGGGGTVYKGVLTDNQVVAIKRLHEVANQGESEFLAEISIIGRLNHMNLISMLGYCAEGKHRLLVYEYMENGSLAHNLSSASNGLDWSKRYNIAVGTARGLAYLHEECLEWILHCDIKPQNILLDSDYKPKVGDFGLSKLLNRNNLNNSSFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVLLEMITGRSPTTGVQLTELEAESPHHERLVTWVREKRMKGSEVGSSWVDQIVDPALGSNYDMNEMEILATVALECVEEEKNARPSMSRVAEKLQGHHTIVDALNKE* 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00642 827 Gene3D Phosphorylase Kinase; domain 1 505 606 - -
Phac10g00642 827 CDD PAN_AP_plant 342 428 - -
Phac10g00642 827 Pfam Protein kinase domain 534 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g00642 827 Gene3D - 31 150 IPR036426 -
Phac10g00642 827 Gene3D Transferase(Phosphotransferase) domain 1 607 825 - -
Phac10g00642 827 Pfam S-locus glycoprotein domain 258 322 IPR000858 GO:0048544
Phac10g00642 827 FunFam Serine/threonine-protein kinase 607 820 - -
Phac10g00642 827 SMART serkin_6 531 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g00642 827 ProSitePatterns Protein kinases ATP-binding region signature. 537 559 IPR017441 GO:0005524
Phac10g00642 827 SUPERFAMILY Protein kinase-like (PK-like) 515 814 IPR011009 -
Phac10g00642 827 CDD B_lectin 43 152 IPR001480 -
Phac10g00642 827 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Phac10g00642 827 Pfam D-mannose binding lectin 73 165 IPR001480 -
Phac10g00642 827 ProSitePatterns Serine/Threonine protein kinases active-site signature. 650 662 IPR008271 GO:0004672|GO:0006468
Phac10g00642 827 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 209 IPR036426 -
Phac10g00642 827 FunFam S-receptor-like serine/threonine-protein kinase 502 606 - -
Phac10g00642 827 CDD STKc_IRAK 537 816 - -
Phac10g00642 827 SMART blect_4 32 152 IPR001480 -
Phac10g00642 827 PANTHER OS07G0415500 PROTEIN 13 818 - -
Phac10g00642 827 ProSiteProfiles Protein kinase domain profile. 531 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g00642 827 PIRSF SRK 1 827 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00642 Phac-Chr10 7974293 7977237 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00642 521 825 Trihelix Transcription Factor Family AT5G38560 43.182 1.35e-73 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Phac10g00642 Pkinase 7.5e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00642 - - gmx:100808940 1332.78