Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00625 ATGTTGGACTACGAATGGGGAAACCCGTCTTCAATAATGCTAACAGGAAACGAGGAGACCGCCGCCGGAGCTTCCGACCAAACCCACCGTCAAATCTTCGACCACTACGCCTCACACTCGCTCATCCCCGACCACTTTCTTCACGCGCCAACACACTCCGCCGCCACCACCGCCGCGGCCGCCACCGTCGACTACACCAACCACCACCACCACTTCAACCCGCAACCCCACCACCACCACCTCAACCACCACCACCACCCGTTCTTCGACCCACGCGCCTTCCACGGCGCGTCGTCCACCTCCTACCCTCCAACCCCATCCATGCTCTCCCTTGACCCGCTGCCCCACGTCAACGCCGCCAACTGCGGCCCAGGGCCCGGACCCGGCCCAGGCGGACTCCTCCTTGTTCCGAAGTCTGAGGACGTCGGGCGGCCCATGGACTTTGTCGGCTCACGAATTGGCCTAAATCTCGGAGGTCGAACGTATTTCTCCTCCGAGGATGATTTCGTCAGCCGTCTCTACCGTCGGTCTCGGCCGGCGGAATCGGGTTCGGCGGCTTCCTCGAACTCGCCGCGCTGCCAGGCCGAGGGATGCAATGCTGATCTGTCTCAGGCCAAGCACTACCACCGCCGCCACAAGGTGTGCGAGTTCCACTCCAAAGCCGCCACCGTTATTGCCGCCGGGTTGACTCAGCGATTCTGCCAGCAATGCAGCAGGTTGTGGTGGCGCTTGTTTGTTCCCCACCGGCGGAAAATTAACATCAATCATTGA 771 0.6174 MLDYEWGNPSSIMLTGNEETAAGASDQTHRQIFDHYASHSLIPDHFLHAPTHSAATTAAAATVDYTNHHHHFNPQPHHHHLNHHHHPFFDPRAFHGASSTSYPPTPSMLSLDPLPHVNAANCGPGPGPGPGGLLLVPKSEDVGRPMDFVGSRIGLNLGGRTYFSSEDDFVSRLYRRSRPAESGSAASSNSPRCQAEGCNADLSQAKHYHRRHKVCEFHSKAATVIAAGLTQRFCQQCSRLWWRLFVPHRRKININH* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00625 256 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 112 239 IPR044817 GO:0003677
Phac10g00625 256 SUPERFAMILY SBT domain 191 241 IPR036893 GO:0003677|GO:0005634
Phac10g00625 256 ProSiteProfiles Zinc finger SBP-type profile. 190 256 IPR004333 GO:0003677
Phac10g00625 256 Pfam SBP domain 193 240 IPR004333 GO:0003677
Phac10g00625 256 Gene3D - 188 242 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00625 Phac-Chr10 7650936 7654335 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00625 1 247 SBP-box Gene Family AT1G02065 44.151 1.70e-59 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Phac10g00625 SBP 4.6e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00625 - - vun:114181599 422.165